ICEberg
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ICE family: ICEM
We selected ICEM as a reference and defined ICEM family. We classified ICE that has significant sequence alignment and syntenic 'core' structure with ICEM into this family.

#IDICE nameStrainReplicon
1223 in_silico ICEMmc-GM12Mycoplasma mycoides subsp. capri str. GM12 transgenic clone deltatypeIIIres
2240 in_silico ICEMmc95010-1aMycoplasma mycoides subsp. capri LC str. 95010NC_015431
3241 in_silico ICEMmc95010-1bMycoplasma mycoides subsp. capri LC str. 95010NC_015431
4421 in_silico ICEMMycoplasma mycoides subsp. capri str. GM12 transgenic clone tetM-lacZCP001621
5422 in_silico ICEMmysMmYCp235Synthetic Mycoplasma mycoides JCVI-syn1.0 clone sMmYCp235-1CP002027
in_silico Putative ICEs predicted by bioinformatic methods
ElementNo. of sequencesDownloadAlignment
Proteins103FastaMultiple protein sequence alignment by MUSCLE online
ICEs5Fasta Nucleotide sequence comparison by webACT
(1) Thiaucourt F et al. (2011). Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective. BMC Genomics. 12:114. [PudMed:21324191]
(2) Gibson DG et al. (2010). Creation of a bacterial cell controlled by a chemically synthesized genome. Science. 329(5987):52-6. [PudMed:20488990]