ICEberg
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ICE family: PPI-1
We selected Sp23F_PPI-1 as a reference and defined PPI-1 family. We classified ICE that has significant sequence alignment and syntenic 'core' structure with Sp23F_PPI-1 into the this family.

#IDICE nameStrainReplicon
1231 in_silico Sp23F_PPI-1Streptococcus pneumoniae ATCC 700669NC_011900
2431 in_silico ICESpnJJA-1Streptococcus pneumoniae JJANC_012466
3432 in_silico ICESpnD39-1Streptococcus pneumoniae D39NC_008533
4433 in_silico ICESpnR6-1Streptococcus pneumoniae R6NC_003098
5434 in_silico ICESpnTIGR4-1Streptococcus pneumoniae TIGR4NC_003028
6435 in_silico ICESpnP1031-2Streptococcus pneumoniae P1031NC_012467
in_silico Putative ICEs predicted by bioinformatic methods
ElementNo. of sequencesDownloadAlignment
Proteins197FastaMultiple protein sequence alignment by MUSCLE online
ICEs6Fasta Nucleotide sequence comparison by webACT
(1) Croucher NJ et al. (2009). Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol. 191(5):1480-9. [PudMed:19114491]
(2) Brown JS et al. (2004). A locus contained within a variable region of pneumococcal pathogenicity island 1 contributes to virulence in mice. Infect Immun. 72(3):1587-93. [PudMed:14977965] experimental
 
experimental experimental literature