ICEberg
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Organism: Streptomyces coelicolor A3(2)
#IDICE nameICE familyReplicon
1163 experimental SLP1UnclassifiedNC_003888
2214 in_silico AICESco3250UnclassifiedNC_003888
3215 in_silico AICESco5349UnclassifiedNC_003888
4238 in_silico AICESco3937UnclassifiedNC_003888
5239 in_silico AICESco3997UnclassifiedNC_003888
experimental Data derived from experimental literature
in_silico Putative ICEs predicted by bioinformatic methods
 

ElementNo. of sequencesDownloadAlignment
ICEs5Fasta Nucleotide sequence comparison by webACT
Proteins87FastaProtein
(1) Liu G; Ou HY; Wang T; Li L; Tan H; Zhou X; Rajakumar K; Deng Z; He X (2010). Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA. PLoS Genet. 6(12):e1001253. [PudMed:21203499] experimental
(2) te Poele EM; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative elements. Antonie Van Leeuwenhoek. 94(1):127-43. [PudMed:18523858]
(3) Brasch MA; Pettis GS; Lee SC; Cohen SN (1993). Localization and nucleotide sequences of genes mediating site-specific recombination of the SLP1 element in Streptomyces lividans. J Bacteriol. 175(10):3067-74. [PudMed:8387993] experimental
(4) Bibb MJ; Ward JM; Kieser T; Cohen SN; Hopwood DA (1981). Excision of chromosomal DNA sequences from Streptomyces coelicolor forms a novel family of plasmids detectable in Streptomyces lividans. Mol Gen Genet. 184(2):230-40. [PudMed:6948998] experimental
(5) Omer CA; Cohen SN (1984). Plasmid formation in Streptomyces: excision and integration of the SLP1 replicon at a specific chromosomal site. Mol Gen Genet. 196(3):429-38. [PudMed:6094971] experimental
(6) Lee SC; Omer CA; Brasch MA; Cohen SN (1988). Analysis of recombination occurring at SLP1 att sites. J Bacteriol. 170(12):5806-13. [PudMed:3056916] experimental
(7) Vogtli M; Cohen SN (1992). The chromosomal integration site for the Streptomyces plasmid SLP1 is a functional tRNA(Tyr) gene essential for cell viability. Mol Microbiol. 6(20):3041-50. [PudMed:1479893] experimental
 
experimental experimental literature