ICEberg
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Organism: Saccharopolyspora erythraea NRRL 2338
#IDICE nameICE familyReplicon
1156 in_silico pSE102UnclassifiedNC_009142
2157 experimental pSE211UnclassifiedNC_009142
3158 in_silico pSE222UnclassifiedNC_009142
experimental Data derived from experimental literature
in_silico Putative ICEs predicted by bioinformatic methods
 

ElementNo. of sequencesDownloadAlignment
ICEs3Fasta Nucleotide sequence comparison by webACT
Proteins60FastaProtein
(1) Bordeleau E; Brouillette E; Robichaud N; Burrus V (2010). Beyond antibiotic resistance: integrating conjugative elements of the SXT/R391 family that encode novel diguanylate cyclases participate to c-di-GMP signalling in Vibrio cholerae. Environ Microbiol. 12(2):510-23. [PudMed:19888998] experimental
(2) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PudMed:18295883] in_silico
(3) Oliynyk M; Samborskyy M; Lester JB; Mironenko T; Scott N; Dickens S; Haydock SF; Leadlay PF (2007). Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338. Nat Biotechnol. 25(4):447-53. [PudMed:17369815]
(4) Brown DP; Idler KB; Katz L (1990). Characterization of the genetic elements required for site-specific integration of plasmid pSE211 in Saccharopolyspora erythraea. J Bacteriol. 172(4):1877-88. [PudMed:2180909] experimental
(5) Katz L; Brown DP; Donadio S (1991). Site-specific recombination in Escherichia coli between the att sites of plasmid pSE211 from Saccharopolyspora erythraea. Mol Gen Genet. 227(1):155-9. [PudMed:2046656] experimental
 
experimental experimental literature
in_silico in silico analysis literature