ICEberg
ICEberg ID109
NameR997
FamilySXT/R391
OrganismProteus mirabilis unknown strain(s)
Size (bp)~85 k
GC content [Genome] (%)-
Insertion siteprfC
FunctionResistance to ampicillin, streptomycin and sulfonamide
Species that ICE can be transferred to-
Nucleotide SequenceAJ579927; AJ579926; AJ579928; AJ579930; AJ580009; EF434299; EF434292; AM412759 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of R997 from AJ580009
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1setR1..269 [+], 26937620124  [UniProt] putative transcriptional regulator
Incomplete gene list of R997 from AJ579930
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-56..265 [+], 21037605501  [UniProt] putative conjugative transfer protein
Incomplete gene list of R997 from AJ579928
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-1..608 [+], 60837605497  [UniProt] putative transfer protein
Incomplete gene list of R997 from AJ579927
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1int1..1106 [+], 110637605495  [UniProt] putative integrase
Incomplete gene list of R997 from AM412759
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1jef1..201 [+], 201121495636  [UniProt] putative excisionase
Incomplete gene list of R997 from EF434299
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1eexS21..432 [+], 432134251751  [UniProt] EexS2
Incomplete gene list of R997 from EF434292
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1traG1..144 [+], 144134251737  [UniProt] TraG
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
regulation Gene may play role in regulation of transfer

ElementNo. of sequencesDownload
Nucleotide sequences8Fasta
Proteins7Fasta
(1) Daccord A; Mursell M; Poulin-Laprade D; Burrus V (2012). Dynamics of the SetCD-Regulated Integration and Excision of Genomic Islands Mobilized by Integrating Conjugative Elements of the SXT/R391 Family. J Bacteriol. 194(21):5794-802. [PudMed:22923590] experimental
(2) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PudMed:17307849] experimental
(3) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PudMed:15686850] experimental
(4) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PudMed:15268933] experimental
(5) Boltner D; Osborn AM (2004). Structural comparison of the integrative and conjugative elements R391, pMERPH, R997, and SXT. Plasmid. 51(1):12-23. [PudMed:14711525] experimental
(6) Murphy DB; Pembroke JT (1999). Monitoring of chromosomal insertions of the IncJ elements R391 and R997 in Escherichia coli K-12. FEMS Microbiol Lett. 174(2):355-61. [PudMed:10339829] experimental
(7) Matthew M; Hedges RW; Smith JT (1979). Types of beta-lactamase determined by plasmids in gram-negative bacteria. J Bacteriol. 138(3):657-62. [PudMed:378931] experimental
 
experimental experimental literature