ICEberg
ICEberg ID110
Namebph-sal
FamilyUnclassified
OrganismPseudomonas putida KF715
Size (bp)~90 k
GC content [Genome] (%)-
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAY275274; AY294313 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of bph-sal from AY275274
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1int1..1896 [+], 189633390905  [UniProt] integrase
Incomplete gene list of bph-sal from AY294313
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1nahR305..1207 [-], 90337220702  [UniProt] NahR
2nahG1363..2676 [+], 131437220703  [UniProt] salicylate hydroxylase
3nahT3119..3457 [+], 33937220704  [UniProt] xylT-like ferredoxin
4nahH3454..4377 [+], 92437220705  [UniProt] catechol 2,3-dioxygenase
5nahI4412..5872 [+], 146137220706  [UniProt] hydoroxymuconic semialdehyde dehydrogenase
6nahN5883..6731 [+], 84937220708  [UniProt] hydoroxymuconic semialdehyde hydrolase
7nahL6728..7528 [+], 80137220707  [UniProt] 2-oxopent-4-enoate hydratase
8nahO7543..8466 [+], 92437220709  [UniProt] acetaldehyde dehydrogenase
9nahM8479..9519 [+], 104137220710  [UniProt] 2-oxo-4-hydroxypentanoate aldolase
10nahK9516..10310 [+], 79537220711  [UniProt] 4-oxalocrotonate decarboxylase
11nahJ10359..10550 [+], 19237220712  [UniProt] 4-oxalocrotonate isomerase
 
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences2Fasta
Proteins12Fasta
(1) Nishi A; Tominaga K; Furukawa K (2000). A 90-kilobase conjugative chromosomal element coding for biphenyl and salicylate catabolism in Pseudomonas putida KF715. J Bacteriol. 182(7):1949-55. [PudMed:10715002] experimental
 
experimental experimental literature