ICEberg
ICEberg ID117
NamepSAM2
FamilyUnclassified
OrganismStreptomyces ambofaciens ATCC 15154 B3
Size (bp)10.9
GC content [Genome] (%)-
Insertion sitetRNA-Pro
FunctionChromosome mobilising ability
Species that ICE can be transferred toStreptomyces lividans
Nucleotide SequenceAF004315; Z19593; X14899; Z19594; Z19589; A09946; M22966; M22965; M22964; M22963; AJ005260 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
 

The gene information of pSAM2 is not available.
ElementNo. of sequencesDownload
Nucleotide sequencesFasta
ProteinsFasta
(1) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PudMed:18295883] in_silico
(2) Possoz C; Gagnat J; Sezonov G; Guerineau M; Pernodet JL (2003). Conjugal immunity of Streptomyces strains carrying the integrative element pSAM2 is due to the pif gene (pSAM2 immunity factor). Mol Microbiol. 47(5):1385-93. [PudMed:12603742] experimental
(3) Sezonov G; Duchene AM; Friedmann A; Guerineau M; Pernodet JL (1998). Replicase, excisionase, and integrase genes of the Streptomyces element pSAM2 constitute an operon positively regulated by the pra gene. J Bacteriol. 180(12):3056-61. [PudMed:9620953] experimental
(4) Seoane A; Navas J; Garcia Lobo JM (1997). Targets for pSAM2 integrase-mediated site-specific integration in the Mycobacterium smegmatis chromosome. Microbiology. 143 ( Pt 10):3375-80. [PudMed:9353939] experimental
(5) Sezonov G; Hagege J; Pernodet JL; Friedmann A; Guerineau M (1995). Characterization of pra, a gene for replication control in pSAM2, the integrating element of Streptomyces ambofaciens. Mol Microbiol. 17(3):533-44. [PudMed:8559072] experimental
(6) Hagege J; Pernodet JL; Sezonov G; Gerbaud C; Friedmann A; Guerineau M (1993). Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: characterization of a kil-kor system associated with transfer. J Bacteriol. 175(17):5529-38. [PudMed:8366038] experimental
(7) Hagege J; Boccard F; Smokvina T; Pernodet JL; Friedmann A; Guerineau M (1994). Identification of a gene encoding the replication initiator protein of the Streptomyces integrating element, pSAM2. Plasmid. 31(2):166-83. [PudMed:8029324] experimental
(8) Hagege J; Pernodet JL; Friedmann A; Guerineau M (1993). Mode and origin of replication of pSAM2, a conjugative integrating element of Streptomyces ambofaciens. Mol Microbiol. 10(4):799-812. [PudMed:7934842] experimental
(9) Pernodet JL; Simonet JM; Guerineau M (1984). Plasmids in different strains of Streptomyces ambofaciens: free and integrated form of plasmid pSAM2. Mol Gen Genet. 198(1):35-41. [PudMed:6596483] experimental
(10) Boccard F; Smokvina T; Pernodet JL; Friedmann A; Guerineau M (1989). The integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens is related to temperate bacteriophages. EMBO J. 8(3):973-80. [PudMed:2721504] experimental
(11) Boccard F; Smokvina T; Pernodet JL; Friedmann A; Guerineau M (1989). Structural analysis of loci involved in pSAM2 site-specific integration in Streptomyces. Plasmid. 21(1):59-70. [PudMed:2657820] experimental
(12) Kuhstoss S; Richardson MA; Rao RN (1989). Site-specific integration in Streptomyces ambofaciens: localization of integration functions in S. ambofaciens plasmid pSAM2. J Bacteriol. 171(1):16-23. [PudMed:2536654] experimental
 
experimental experimental literature
in_silico in silico analysis literature