ICEberg
ICEberg ID124
NamepRS01
FamilyUnclassified
OrganismLactococcus lactis subsp. lactis ML3
Size (bp)-
GC content [Genome] (%)48.4
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceU50902 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of pRS01 from U50902
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1ltrM1386..3155 [+], 1770124358402  [UniProt] LtrM
2ltrC3207..4859 [+], 1653124358399  [UniProt] LtrC
3ltrD4932..5408 [+], 4771408585  [UniProt] LtrD
4ltrE5639..6343 [+], 705124358400  [UniProt] LtrE
5ltrF6386..6742 [+], 357124358401  [UniProt] LtrF
6ltrB6742..10925 [+], 4184126566161  [UniProt] relaxase
7ltrA7795..9594 [+], 18001408588  [UniProt] putative maturase
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins7Fasta
(1) Belhocine K; Mandilaras V; Yeung B; Cousineau B (2007). Conjugative transfer of the Lactococcus lactis sex factor and pRS01 plasmid to Enterococcus faecalis. FEMS Microbiol Lett. 269(2):289-94. [PudMed:17263841] experimental
(2) Mills DA; McKay LL; Dunny GM (1996). Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci. J Bacteriol. 178(12):3531-8. [PudMed:8655550] experimental
(3) Mills DA; Choi CK; Dunny GM; McKay LL (1994). Genetic analysis of regions of the Lactococcus lactis subsp. lactis plasmid pRS01 involved in conjugative transfer. Appl Environ Microbiol. 60(12):4413-20. [PudMed:7811081] experimental
 
experimental experimental literature