ICEberg
ICEberg
ICEberg ID126
NameICEKp1
FamilyICEKp1
OrganismKlebsiella pneumoniae NTUH-K2044
Size (bp)75935
GC content [Genome] (%)52 [58]
Insertion sitetRNA-asn(KP1_6086)
Function-
Species that ICE can be transferred toKlebsiella pneumoniae
Nucleotide SequenceAB298504; AP006725 (complete ICE sequence in this genome)
Replicon chromosome (5248520 bp, Project:21069) [NC_012731]
Genome coordinates3395836..3471770
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICEKp1 form AP006725
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1KP1_35773390903..3391607 [-], 705238547821 putative TetR-family trancriptional regulatory protein
2KP1_35783392198..3393832 [+], 1635238547822 putative sodium:hydrogen antiporter
3yeeO3394131..3395600 [-], 1470238547823 putative MATE family transport protein
4int3395997..3397259 [+], 1263238547824  [UniProt] integraseVF
5ybtS3397453..3398757 [-], 1305238547825  [UniProt] putative salicylate synthetaseVF
6ybtX3398785..3400188 [-], 1404238547826  [UniProt] putative cytoplasmic transmembrane proteinVF
7ybtQ3400058..3401887 [-], 1830238547827  [UniProt] putative ABC transporter proteinVF
8ybtP3401847..3403649 [-], 1803238547828  [UniProt] putative inner membrane ABC-transporterVF
9ybtA3403816..3404775 [+], 960238547829  [UniProt] transcriptional regulatorVF
10irp23404966..3411073 [+], 6108238547830  [UniProt] yersiniabactin biosynthetic proteinVF
11irp13411161..3420652 [+], 9492238547831  [UniProt] yersiniabactin biosynthetic proteinVF
12ybtU3420589..3421749 [+], 1161238547832  [UniProt] thiazolinyl-S-HMWP1 reductaseVF
13ybtT3421746..3422549 [+], 804238547833  [UniProt] yersiniabactin biosynthetic proteinVF
14ybtE3422553..3424130 [+], 1578238547834  [UniProt] yersiniabactin siderophore biosynthetic proteinVF
15fyuA3424261..3426282 [+], 2022238547835  [UniProt] pesticin/yersiniabactin receptorVF
16KP1_35953427155..3428081 [+], 927238547836  [UniProt] conserved hypothetical protein
17alpA23428221..3428406 [+], 186238547837  [UniProt] putative transcriptional regulatorVF
18KP1_35973428595..3429176 [+], 582238547838  [UniProt] conserved hypothetical protein
19KP1_35993429618..3429731 [+], 114238547839  [UniProt] conserved hypothetical protein
20KP1_36003429775..3430386 [-], 612238547840  [UniProt] unnamed protein productVF
21KP1_36013430310..3430501 [-], 192238547841  [UniProt] transposase/IS proteinVF
22KP1_36023430528..3430620 [-], 93238547842  [UniProt] putative transposaseVF
23KP1_36033430596..3431498 [-], 903238547843  [UniProt] putative transposaseVF
24KP1_36043431686..3432066 [-], 381238547844  [UniProt] hypothetical protein
25vagC3432509..3432739 [+], 231238547845  [UniProt] virulence-associated proteinTA
26vagD3432736..3433152 [+], 417238547846  [UniProt] putative DNA binding proteinTA
27KP1_36073433170..3433433 [+], 264238547847  [UniProt] hypothetical protein
28iroN3433588..3435762 [-], 2175238547848  [UniProt] enterochelin and dihydrobenzoic acid receptorVF
29iroB3436634..3437749 [+], 1116238547849  [UniProt] putative UDP-glucoronosyl and UDP-glucosyl transferaseVF
30iroC3437836..3441531 [+], 3696238547850  [UniProt] putative ABC transporterVF
31iroD3441637..3442866 [+], 1230238547851  [UniProt] ferric enterochelin esteraseVF
32pagO3443871..3444785 [-], 915238547852  [UniProt] putative PhoPQ-activated integral membrane protein
33KP1_36163444858..3445409 [-], 552238547853  [UniProt] hypothetical protein
34KP1_36173445596..3445742 [+], 147238547854  [UniProt] hypothetical protein
35rmpA3445784..3446416 [-], 633238547855  [UniProt] regulator of mucoid phenotype
36KP1_36203446430..3446594 [+], 165238547856  [UniProt] hypothetical protein
37KP1_36213446958..3447611 [+], 654238547857  [UniProt] hypothetical protein
38KP1_36233447691..3447792 [-], 102238547858  [UniProt] putative transposase
39KP1_36243448249..3448434 [-], 186238547859  [UniProt] transposase/IS proteinVF
40KP1_36253448919..3449152 [+], 234238547860  [UniProt] putative ATP/GTP-binding protein remnant
41virB13449225..3449935 [+], 711238547861  [UniProt] type IV secretory pathway VirB1 component
42virB23449935..3450228 [+], 294238547862  [UniProt] type IV secretory pathway VirB2 component
43virB3-43450241..3452979 [+], 2739238547863  [UniProt] type IV secretory pathway VirB3-4 component
44virB53452997..3453701 [+], 705238547864  [UniProt] type IV secretion system VirB5 component
45KP1_36303453711..3453938 [+], 228238547865  [UniProt] conserved hypothetical protein
46virB63453950..3455029 [+], 1080238547866  [UniProt] type IV secretion system VirB6 component
47virB83455245..3455928 [+], 684238547867  [UniProt] type IV secretion system VirB8 component
48virB93455925..3456833 [+], 909238547868  [UniProt] type IV secretory pathway VirB9 component
49virB103456877..3458127 [+], 1251238547869  [UniProt] type IV secretory pathway VirB10 component
50virB113458117..3459142 [+], 1026238547870  [UniProt] type IV secretory pathway VirB11 componentVF
51KP1_36373459139..3459537 [+], 399238547871  [UniProt] hypothetical protein
52KP1_36383459573..3459875 [+], 303238547872  [UniProt] conserved hypothetical protein
53KP1_36393459918..3460223 [+], 306238547873  [UniProt] putative dopa decarboxylase protein remnant
54KP1_36403460334..3460636 [+], 303238547874  [UniProt] hypothetical protein
55mobB3460903..3462792 [+], 1890238547875  [UniProt] mobilization protein
56mobC3462802..3463548 [+], 747238547876  [UniProt] mobilization protein
57ardC3463744..3464691 [-], 948238547877  [UniProt] antirestriction protein
58KP1_36443465676..3466491 [-], 816238547878  [UniProt] hypothetical protein
59KP1_36453466792..3467139 [-], 348238547879  [UniProt] hypothetical protein
60KP1_36463467139..3468509 [-], 1371238547880  [UniProt] UBA/THIF-type NAD/FAD binding fold
61KP1_36473468506..3469633 [-], 1128238547881  [UniProt] hypothetical protein
62KP1_36483469728..3470276 [-], 549238547882  [UniProt] conserved hypothetical protein
63KP1_36493470319..3471422 [-], 1104238547883  [UniProt] hypothetical protein
64KP1_36503471621..3471770 [-], 150238547884  [UniProt] hypothetical protein
65KP1_36513472308..3473411 [+], 1104238547885 hypothetical protein
66KP1_36523473408..3474379 [-], 972238547886 hypothetical protein
67KP1_36533474586..3475563 [-], 978238547887 putative non-heme chloroperoxidase
68KP1_36543475615..3476190 [-], 576238547888 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins61Fasta
(1) Wu KM; Li LH; Yan JJ; Tsao N; Liao TL; Tsai HC; Fung CP; Chen HJ; Liu YM; Wang JT; Fang CT; Chang SC; Shu HY; Liu TT; Chen YT; Shiau YR; Lauderdale TL; Su IJ; Kirby R; Tsai SF (2009). Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis. J Bacteriol. 191(14):4492-501. [PudMed:19447910]
(2) Lin TL; Lee CZ; Hsieh PF; Tsai SF; Wang JT (2008). Characterization of integrative and conjugative element ICEKp1-associated genomic heterogeneity in a Klebsiella pneumoniae strain isolated from a primary liver abscess. J Bacteriol. 190(2):515-26. [PudMed:17981959] experimental
 
experimental experimental literature