ICEberg
ICEberg
ICEberg ID127
NameICEKpn342-1
FamilyUnclassified
OrganismKlebsiella pneumoniae 342
Size (bp)70230
GC content [Genome] (%)49 [57]
Insertion sitetRNA-asn(KPK_1812)
FunctionPutrescine synthesis and polyamines metabolism
Species that ICE can be transferred to-
Nucleotide SequenceCP000964 (complete ICE sequence in this genome)
Replicon chromosome (5641239 bp, Project:28471) [NC_011283]
Genome coordinates1810666..1880895
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEKpn342-1 form CP000964
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1KPK_17481806792..1807769 [-], 978206569583 quinone oxidoreductase, YhdH family
2KPK_17491807766..1808473 [-], 708206567070 transcriptional regulator, TetR family
3KPK_17501809030..1810664 [+], 1635206566284 Na+/H+ antiporter
4KPK_17521812100..1813017 [+], 918206566002  [UniProt]  [KEGG]putative cysteine synthase B
5KPK_17531813010..1813438 [+], 429206565242  [UniProt]  [KEGG]conserved hypothetical protein
6KPK_17541813498..1813788 [+], 291206569763  [UniProt]  [KEGG]thiS family protein
7KPK_17551813785..1814960 [+], 1176206569192  [UniProt]  [KEGG]putative thiazole biosynthesis adenylyltransferase ThiF/rhodanese domain protein
8KPK_17561814998..1815942 [+], 945206568116  [UniProt]  [KEGG]conserved hypothetical protein
9KPK_17571815929..1817419 [+], 1491206567547  [UniProt]  [KEGG]cysteine desulfurase, SufS family
10KPK_17581817656..1822089 [-], 4434206566624  [UniProt]  [KEGG]hypothetical protein
11KPK_17591822758..1824380 [+], 1623206565985  [UniProt]  [KEGG]hypothetical protein
12KPK_17601824430..1826628 [+], 2199206569271  [UniProt]  [KEGG]putative helicase
13KPK_17611826914..1827858 [+], 945206569039  [UniProt]  [KEGG]putative antirestriction protein
14KPK_17621828278..1829189 [-], 912206565175  [UniProt]  [KEGG]hypothetical protein
15KPK_17631829309..1829989 [-], 681206565753  [UniProt]  [KEGG]hypothetical protein
16KPK_17641830383..1831324 [-], 942206565389  [UniProt]  [KEGG]conserved hypothetical protein
17KPK_17651831716..1831844 [-], 129206567216  [UniProt]  [KEGG]hypothetical protein
18KPK_17661832136..1833110 [-], 975206566697  [UniProt]  [KEGG]oxidoreductase, zinc-binding dehydrogenase family
19KPK_17671833218..1834075 [+], 858206568266  [UniProt]  [KEGG]transcriptional regulator, LysR familyVF
20KPK_17681834119..1835135 [-], 1017206567597  [UniProt]  [KEGG]site-specific recombinase, phage integrase familyVF
21KPK_17691835128..1836054 [-], 927206569793  [UniProt]  [KEGG]site-specific recombinase, phage integrase family
22KPK_17701836051..1836998 [-], 948206569090  [UniProt]  [KEGG]site-specific recombinase, phage integrase family
23KPK_17711837137..1838030 [-], 894206565122  [UniProt]  [KEGG]DNA methylase
24KPK_17721838023..1838826 [-], 804206568843  [UniProt]  [KEGG]putative mobC protein
25KPK_17731838835..1840571 [-], 1737206568447  [UniProt]  [KEGG]type IV conjugative transfer system coupling protein TraD
26KPK_17741841340..1841642 [-], 303206568648  [UniProt]  [KEGG]putative lipoprotein
27virB111841703..1842722 [-], 1020206566906  [UniProt]  [KEGG]P-type DNA transfer ATPase VirB11
28KPK_17761842712..1844019 [-], 1308206566313  [UniProt]  [KEGG]bacterial conjugation TrbI-like protein
29virB91844016..1844906 [-], 891206566738  [UniProt]  [KEGG]P-type conjugative transfer protein VirB9
30virB81844903..1845586 [-], 684206566094  [UniProt]  [KEGG]type IV secretion system protein VirB8
31KPK_17791845579..1845719 [-], 141206565243  [UniProt]  [KEGG]putative conjugal transfer protein
32KPK_17801845809..1846828 [-], 1020206569732  [UniProt]  [KEGG]TrbL/VirB6 plasmid conjugal transfer protein
33KPK_17811846900..1847175 [-], 276206566551  [UniProt]  [KEGG]putative lipoprotein
34KPK_17821847187..1847915 [-], 729206567346  [UniProt]  [KEGG]type IV secretion system protein
35KPK_17831847938..1850685 [-], 2748206567866  [UniProt]  [KEGG]type IV secretion/conjugal transfer ATPase, VirB4 family
36KPK_17841850697..1850969 [-], 273206568808  [UniProt]  [KEGG]putative type IV secretion system protein
37KPK_17851850972..1851616 [-], 645206569363  [UniProt]  [KEGG]transglycosylase SLT domain protein
38KPK_17861851688..1851909 [-], 222206569729  [UniProt]  [KEGG]conserved hypothetical protein
39KPK_17871852304..1852513 [-], 210206564901  [UniProt]  [KEGG]phage/conjugal plasmid C-4 type zinc finger protein, TraR family
40KPK_17881852503..1853090 [-], 588206565124  [UniProt]  [KEGG]conserved hypothetical protein
41KPK_17891853144..1853353 [-], 210206566450  [UniProt]  [KEGG]transcriptional regulator, AlpA familyVF
42KPK_17901853686..1854603 [-], 918206566696  [UniProt]  [KEGG]conserved hypothetical protein
43KPK_17911854863..1856047 [-], 1185206568676  [UniProt]  [KEGG]transporter, major facilitator family
44KPK_17921856044..1857279 [-], 1236206569408  [UniProt]  [KEGG]conserved hypothetical protein
45KPK_17931857329..1858684 [-], 1356206570188  [UniProt]  [KEGG]oxidase, FAD-binding
46KPK_17941858730..1859782 [-], 1053206564813  [UniProt]  [KEGG]hypothetical protein
47KPK_17951859791..1860528 [-], 738206566702  [UniProt]  [KEGG]threonyl and alanyl tRNA synthetase domain protein
48KPK_17961860585..1861637 [-], 1053206566349  [UniProt]  [KEGG]putative histidinol-phosphate aminotransferase
49KPK_17971861634..1863217 [-], 1584206566884  [UniProt]  [KEGG]putative histidine ammonia-lyase
50KPK_17981863244..1864251 [-], 1008206568622  [UniProt]  [KEGG]conserved hypothetical protein
51KPK_17991864670..1865920 [-], 1251206569035  [UniProt]  [KEGG]integraseVF
52KPK_18001866564..1867484 [+], 921206570143  [UniProt]  [KEGG]transcriptional regulator, LysR family
53KPK_18011867529..1869019 [-], 1491206565313  [UniProt]  [KEGG]putative gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
54alkJ1869012..1870658 [-], 1647206564858  [UniProt]  [KEGG]alcohol dehydrogenase (acceptor)
55KPK_18031870673..1872076 [-], 1404206565479  [UniProt]  [KEGG]permease, cytosine/purine, uracil, thiamine, allantoin family
56KPK_18041872685..1873953 [+], 1269206566973  [UniProt]  [KEGG]conserved hypothetical protein
57KPK_18051873963..1874388 [+], 426206567745  [UniProt]  [KEGG]endoribonuclease L-PSP family protein
58KPK_18061874385..1875059 [+], 675206568499  [UniProt]  [KEGG]conserved hypothetical protein
59KPK_18071875052..1876212 [+], 1161206569215  [UniProt]  [KEGG]putative acetylornithine deacetylase
60KPK_18091877500..1877697 [+], 198206566706  [UniProt]  [KEGG]hypothetical protein
61KPK_18111879467..1880735 [-], 1269206565841  [UniProt]  [KEGG]integraseVF
62nac1881303..1882220 [+], 918206565224 nitrogen assimilation regulatory protein Nac
63cbl1882327..1883277 [+], 951206568424 transcriptional regulator Cbl
64KPK_18151883361..1884296 [+], 936206567529 ErfK/YbiS/YcfS/YnhG family protein
65KPK_18161884495..1884731 [-], 237206567437 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins58Fasta
(1) Zhang J; van Aartsen JJ; Jiang X; Shao Y; Tai C; He X; Tan Z; Deng Z; Jia S; Rajakumar K; Ou HY (2011). Expansion of the known Klebsiella pneumoniae species gene pool by characterization of novel alien DNA islands integrated into tmRNA gene sites. J Microbiol Methods. 84(2):283-9. [PudMed:21182879] experimental
(2) Identified as part of this study from CP000964
 
experimental experimental literature