ICEberg
ICEberg ID131
NameICEDzeEch1591-1
FamilyICEKp1
OrganismDickeya zeae Ech1591
Size (bp)53865
GC content [Genome] (%)51 [55]
Insertion sitetRNA-asn(Dd1591_R0046)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP001655 (complete ICE sequence in this genome)
Replicon chromosome (4813854 bp, Project:31295) [NC_012912]
Genome coordinates1679168..1733032
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEDzeEch1591-1 form CP001655
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Dd1591_14631675457..1676608 [-], 1152247537702 conserved hypothetical protein
2Dd1591_14641676724..1677704 [-], 981247537703 aldo/keto reductase
3Dd1591_14661679539..1679700 [-], 162247537704  [UniProt]  [KEGG]hypothetical protein
4Dd1591_14671679797..1685643 [-], 5847247537705  [UniProt]  [KEGG]DEAD/DEAH box helicase domain protein
5Dd1591_14681685663..1687750 [-], 2088247537706  [UniProt]  [KEGG]conserved hypothetical protein
6Dd1591_14691687763..1690324 [-], 2562247537707  [UniProt]  [KEGG]conserved hypothetical protein
7Dd1591_14701690321..1691556 [-], 1236247537708  [UniProt]  [KEGG]DNA-cytosine methyltransferase
8Dd1591_14711691841..1692863 [+], 1023247537709  [UniProt]  [KEGG]conserved hypothetical protein
9Dd1591_14731693607..1694551 [+], 945247537710  [UniProt]  [KEGG]domain of unknown function DUF1738
10Dd1591_14741694872..1695108 [+], 237247537711  [UniProt]  [KEGG]Post-segregation antitoxin CcdATA
11Dd1591_14751695111..1695425 [+], 315247537712  [UniProt]  [KEGG]CcdB proteinTA
12Dd1591_14761695443..1696174 [-], 732247537713  [UniProt]  [KEGG]putative MobC protein
13Dd1591_14771696183..1698012 [-], 1830247537714  [UniProt]  [KEGG]type IV conjugative transfer system coupling protein TraD
14Dd1591_14781698683..1698985 [-], 303247537715  [UniProt]  [KEGG]putative lipoprotein
15Dd1591_14791699026..1700042 [-], 1017247537716  [UniProt]  [KEGG]Sigma 54 interacting domain protein
16Dd1591_14801700032..1701234 [-], 1203247537717  [UniProt]  [KEGG]conjugation TrbI family protein
17Dd1591_14811701231..1702121 [-], 891247537718  [UniProt]  [KEGG]P-type conjugative transfer protein VirB9
18Dd1591_14821702121..1702804 [-], 684247537719  [UniProt]  [KEGG]VirB8 family protein
19Dd1591_14831702797..1702937 [-], 141247537720  [UniProt]  [KEGG]putative conjugal transfer protein
20Dd1591_14841703025..1704053 [-], 1029247537721  [UniProt]  [KEGG]TrbL/VirB6 plasmid conjugal transfer protein
21Dd1591_14851704065..1704289 [-], 225247537722  [UniProt]  [KEGG]conserved hypothetical protein; putative exported protein
22Dd1591_14861704300..1705016 [-], 717247537723  [UniProt]  [KEGG]type IV secretion system family protein
23Dd1591_14871705041..1707788 [-], 2748247537724  [UniProt]  [KEGG]CagE TrbE VirB component of type IV transporter system
24Dd1591_14881707798..1708073 [-], 276247537725  [UniProt]  [KEGG]Conjugal transfer protein TrbC
25Dd1591_14891708093..1708740 [-], 648247537726  [UniProt]  [KEGG]Lytic transglycosylase catalytic
26Dd1591_14901708810..1709043 [-], 234247537727  [UniProt]  [KEGG]conserved hypothetical protein
27Dd1591_14911709363..1710400 [+], 1038247537728  [UniProt]  [KEGG]hypothetical protein
28Dd1591_14921710394..1712670 [+], 2277247537729  [UniProt]  [KEGG]helicase domain protein
29Dd1591_14931712751..1713959 [+], 1209247537730  [UniProt]  [KEGG]transposase mutator type
30Dd1591_14941714453..1714662 [-], 210247537731  [UniProt]  [KEGG]transcriptional regulator, TraR/DksA family
31Dd1591_14951714652..1715236 [-], 585247537732  [UniProt]  [KEGG]conserved hypothetical protein
32Dd1591_14961715253..1715447 [-], 195247537733  [UniProt]  [KEGG]phage transcriptional regulator, AlpAVF
33Dd1591_14971715942..1716199 [-], 258247537734  [UniProt]  [KEGG]transcriptional regulator, XRE family
34Dd1591_14981716313..1716591 [-], 279247537735  [UniProt]  [KEGG]transcriptional regulator, XRE family
35Dd1591_14991716725..1717012 [+], 288247537736  [UniProt]  [KEGG]putative transcriptional regulator, Nlp
36Dd1591_15001717345..1717590 [-], 246247537737  [UniProt]  [KEGG]transcriptional regulator, XRE family
37Dd1591_15011717937..1718455 [+], 519247537738  [UniProt]  [KEGG]type VI secretion system effector, Hcp1 family
38Dd1591_15021718568..1720421 [+], 1854247537739  [UniProt]  [KEGG]type VI secretion system Vgr family proteinVF
39Dd1591_15031720435..1720842 [+], 408247537740  [UniProt]  [KEGG]Domain of unknown function DUF1795
40Dd1591_15041720854..1725227 [+], 4374247537741  [UniProt]  [KEGG]YD repeat protein
41Dd1591_15051725224..1725649 [+], 426247537742  [UniProt]  [KEGG]conserved hypothetical protein
42Dd1591_15071726467..1726898 [+], 432247537743  [UniProt]  [KEGG]conserved hypothetical protein
43Dd1591_15081727147..1728073 [-], 927247537744  [UniProt]  [KEGG]conserved hypothetical protein
44Dd1591_15091729091..1729402 [+], 312247537745  [UniProt]  [KEGG]protein of unknown function DUF736
45Dd1591_15111730176..1730448 [-], 273247537746  [UniProt]  [KEGG]putative transcriptional regulator, Nlp
46Dd1591_15121730674..1730910 [+], 237247537747  [UniProt]  [KEGG]putative transcriptional regulator
47Dd1591_15131731123..1731410 [+], 288247537748  [UniProt]  [KEGG]transcriptional regulator, XRE family
48Dd1591_15141731524..1732795 [-], 1272247537749  [UniProt]  [KEGG]integrase family proteinVF
49Dd1591_15151733417..1733692 [+], 276247537750 transcriptional regulator, LysR family
50Dd1591_15161733788..1735197 [-], 1410247537751 amino acid permease-associated region
51Dd1591_15171735871..1736095 [-], 225247537752 conserved hypothetical protein
52Dd1591_15181736746..1737408 [+], 663247537753 two component transcriptional regulator, LuxR family
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins46Fasta
Identified as part of this study from CP001655