ICEberg
ICEberg
ICEberg ID132
NameICEEcoUMN026-1
FamilyICEKp1
OrganismEscherichia coli UMN026
Size (bp)65732
GC content [Genome] (%)52 [51]
Insertion sitetRNA-asn(ECUMN_tRNA17)
FunctionYersiniabactin synthesis
Species that ICE can be transferred to-
Nucleotide SequenceCU928163 (complete ICE sequence in this genome)
Replicon chromosome (5202090 bp, Project:33415) [NC_011751]
Genome coordinates2277431..2343162
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEEcoUMN026-1 form CU928163
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1yedX2272534..2272947 [+], 414218432558 conserved hypothetical protein
2yedY2273056..2274060 [+], 1005218432559 exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export
3yedZ2274061..2274696 [+], 636218432560 heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit
4yodA2274953..2275603 [+], 651218432561 conserved hypothetical protein; putative metal-binding protein
5yeeI2276457..2277254 [+], 798218432562 conserved hypothetical protein
6int2277592..2278854 [+], 1263218432563  [UniProt] integraseVF
7irp2279048..2280352 [-], 1305218432564  [UniProt] Salicylate synthaseVF
8irp2280380..2281783 [-], 1404218432565  [UniProt] putative permease of yersiniabactin-iron transporter YbtXVF
9irp2281653..2283482 [-], 1830218432566  [UniProt] permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQVF
10irp2283442..2285244 [-], 1803218432567  [UniProt] permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtPVF
11ybtA2285411..2286370 [+], 960218432568  [UniProt] AraC type regulator of yersiniabactin gene cluster (HPI)VF
12irp2286543..2292668 [+], 6126218432569  [UniProt] High-molecular-weight nonribosomal peptide/polyketide synthetase 2 (HMWP2)VF
13irp2292756..2302247 [+], 9492218432570  [UniProt] High-molecular-weight nonribosomal peptide/polyketide synthetase 1 (HMWP1)VF
14irp2302184..2303344 [+], 1161218432571  [UniProt] Thiazolinyl-S-HMWP1 reductase YbtUVF
15irp2303341..2304144 [+], 804218432572  [UniProt] putative thioesterase YbtTVF
16irp2304148..2305725 [+], 1578218432573  [UniProt] salicyl-AMP ligase YbtEVF
17fyuA2305856..2307877 [+], 2022218432574  [UniProt] Yersiniabactin/pesticin outer membrane receptor (IRPC)VF
18ECUMN_22792308691..2309674 [+], 984218432575  [UniProt] conserved hypothetical protein
19ECUMN_22802310018..2310203 [+], 186218432576  [UniProt] conserved hypothetical protein
20ECUMN_22812310188..2310769 [+], 582218432577  [UniProt] conserved hypothetical protein
21ECUMN_22822310759..2310968 [+], 210218432578  [UniProt] putative lambdoid prophage protein from the DksA/TraR family with a zinc finger
22ECUMN_22832311211..2311339 [+], 129218432579  [UniProt] conserved hypothetical proteinVF
23ECUMN_22842312196..2312924 [+], 729218432580  [UniProt] putative type IV secretory pathway VirB1 component
24ECUMN_22852312924..2313217 [+], 294218432581  [UniProt] putative type IV secretory pathway VirB2 component
25ECUMN_22862313230..2315968 [+], 2739218432582  [UniProt] putative type IV secretory pathway VirB4 component
26ECUMN_22872315987..2316700 [+], 714218432583  [UniProt] putative type IV secretory pathway VirB5 component
27ECUMN_22882316708..2316950 [+], 243218432584  [UniProt] conserved hypothetical protein; putative exported protein
28ECUMN_22892316954..2317298 [+], 345218432585  [UniProt] Type IV secretory pathway VirB6 component (fragment)
29insH2317336..2318352 [-], 1017218432586  [UniProt] IS5 transposase and trans-activator; CP4-44 prophage
30ECUMN_22912318315..2319226 [+], 912218432587  [UniProt] Type IV secretory pathway VirB6 component (fragment)
31ECUMN_22922319444..2320127 [+], 684218432588  [UniProt] putative type IV secretory pathway VirB8 component
32ECUMN_22932320124..2321032 [+], 909218432589  [UniProt] putative type IV secretory pathway VirB9 component
33ECUMN_22942321070..2322338 [+], 1269218432590  [UniProt] putative type IV secretory pathway VirB10 component
34ECUMN_22952322328..2323353 [+], 1026218432591  [UniProt] putative type IV secretory pathway VirB11 componentVF
35ECUMN_22962323520..2323753 [+], 234pseudogene conserved hypothetical protein (partial)
36ECUMN_22972323789..2324091 [+], 303218432592  [UniProt] kikA from plasmid origin; putative exported protein
37ECUMN_22982324136..2324441 [+], 306218432593  [UniProt] conserved hypothetical protein
38ECUMN_22992325151..2327010 [+], 1860218432594  [UniProt] putative MobB mobilization protein
39ECUMN_23002327014..2327766 [+], 753218432595  [UniProt] putative MobC mobilization protein
40ECUMN_23012327959..2329098 [-], 1140218432596  [UniProt] putative Antirestriction protein ardC
41ECUMN_23022329140..2329373 [+], 234218432597  [UniProt] hypothetical proteinVF
42ECUMN_23032329496..2329807 [+], 312218432598  [UniProt] hypothetical protein
43ECUMN_23042329909..2330904 [+], 996218432599  [UniProt] conserved hypothetical protein; putative Restriction endonuclease; putqtive coiled-coil
44ECUMN_23052330901..2331989 [+], 1089218432600  [UniProt] conserved hypothetical protein
45ECUMN_23062331974..2332480 [+], 507218432601  [UniProt] conserved hypothetical protein
46ECUMN_23072332477..2334357 [+], 1881218432602  [UniProt] conserved hypothetical protein; putative ATPase involved in DNA repair; putative coiled-coil protein
47ECUMN_23082334641..2335660 [-], 1020218432603  [UniProt] conserved hypothetical protein
48ECUMN_23092335692..2335829 [-], 138218432604  [UniProt] hypothetical protein
49ECUMN_23102337029..2339305 [+], 2277218432605  [UniProt] conserved hypothetical protein
50ECUMN_23122339420..2340520 [+], 1101218432606  [UniProt] putative Retron-type reverse transcriptase
51ECUMN_23132341176..2341670 [-], 495218432607  [UniProt] hypothetical protein
52ECUMN_23142342042..2342320 [-], 279218432608  [UniProt] hypothetical protein
53ECUMN_23152342428..2342571 [-], 144218432609  [UniProt] hypothetical protein
54ECUMN_23162342466..2342945 [-], 480218432610  [UniProt] conserved hypothetical protein, putative transposase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins48Fasta
Identified as part of this study from CU928163