ICEberg
ICEberg ID136
NameICEVchLao1
FamilySXT/R391
OrganismVibrio cholerae 00LA1
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAB115497; AB185252; AB186353 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of ICEVchLao1 from AB115497
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1orf1807..2684 [+], 187849257016  [UniProt] putative exonuclease
2orf22966..4573 [+], 160849257017  [UniProt] putative helicase
Incomplete gene list of ICEVchLao1 from AB185252
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-119..358 [+], 24078042218  [UniProt] hypothetical protein
2-372..959 [+], 58878042219  [UniProt] hypothetical protein
Incomplete gene list of ICEVchLao1 from AB186353
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-156..1094 [-], 93978042233  [UniProt] hypothetical proteinTA
2-1087..1920 [-], 83478042234  [UniProt] hypothetical proteinTA
 
TA: Blastp hit against the Type 2 toxin-antitoxin locus database TADB.

ElementNo. of sequencesDownload
Nucleotide sequences3Fasta
Proteins6Fasta
(1) Iwanaga M; Toma C; Miyazato T; Insisiengmay S; Nakasone N; Ehara M (2004). Antibiotic resistance conferred by a class I integron and SXT constin in Vibrio cholerae O1 strains isolated in Laos. Antimicrob Agents Chemother. 48(7):2364-9. [PudMed:15215082] experimental
 
experimental experimental literature