ICEberg
ICEberg ID148
NameSXT(HN1)
FamilySXT/R391
OrganismVibrio cholerae O1 biovar El tor HN1
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAB450045 (partical ICE sequence)
search genbank This ICE is derived from GenBank without published report.
Incomplete gene list of SXT(HN1) from AB450045
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1int1..1242 [-], 1242194686985  [UniProt] integrase
2s0021244..1513 [-], 270194686986  [UniProt] hypothetical protein
3s0031516..2490 [-], 975194686987  [UniProt] hypothetical protein
4rumB3409..4581 [-], 1173194686988  [UniProt] RumB, UV repair DNA polymerase
5tnp4865..5458 [+], 594194686989  [UniProt] putative transposase
6tnpA5572..8550 [+], 2979194686990  [UniProt] putative transposase
7tnpB8968..10461 [+], 1494194686991  [UniProt] putative transposase
8s01310492..10776 [+], 285194686992  [UniProt] hypothetical protein
9tetA10840..12042 [-], 1203194686993  [UniProt] tetracycline resistance protein TetAVF
10tetR12123..12725 [+], 603194686994  [UniProt] tetracycline resistance repressor protein TetRVF
11tnpB12904..13443 [+], 540194686995  [UniProt] putative truncated transposase
12strB13415..14251 [-], 837194686996  [UniProt] streptomycin phosphotransferaseAR
13strA14251..14742 [-], 492194686997  [UniProt] streptomycin phosphotransferaseAR
14sulII15115..15930 [-], 816194686998  [UniProt] dihydropteroate synthase type IIAR
15tnpA16401..17279 [+], 879194686999  [UniProt] putative transposase
16s02117482..18204 [-], 723194687000  [UniProt] hypothetical protein
17rumB18357..18665 [-], 309194687001  [UniProt] UV repair DNA polymerase RumB
18rumA18634..19083 [-], 450194687002  [UniProt] UV repair protein, RumA
 
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins18Fasta
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