ICEberg
ICEberg ID152
NameCTn9343
FamilyUnclassified
OrganismBacteroides fragilis NCTC 9343
Size (bp)77120
GC content [Genome] (%)45 [43]
Insertion site-
Function-
Species that ICE can be transferred toBacteroides fragilis
Nucleotide SequenceCR626927 (complete ICE sequence in this genome)
Replicon chromosome (5205140 bp, Project:46) [NC_003228]
Genome coordinates1727162..1804281
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of CTn9343 form CR626927
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1BF14531722990..1724687 [-], 169860492392 putative transmembrane protein
2BF14541724840..1725808 [+], 96960492393 putative transmembrane protein
3BF14551726098..1727007 [-], 910pseudogene conserved hypothetical protein (pseudogene)
4BF14571727125..1729476 [+], 235260492394 putative type I restriction enzyme
5BF14581729479..1730999 [+], 152160492395  [UniProt]  [KEGG]putative type I RM modification enzyme
6BF14591731015..1732031 [+], 101760492396  [UniProt]  [KEGG]putative DNA-binding protein
7BF14601732024..1732470 [+], 44760492397  [UniProt]  [KEGG]hypothetical protein
8BF14611732497..1733840 [+], 134460492398  [UniProt]  [KEGG]putative type I restriction enzyme specificity protein
9BF14621733797..1734171 [+], 37560492399  [UniProt] putative transposase
10BF14621733797..1734168 [+], 372pseudogene putative transposase (fragment)
11BF14621734232..1734549 [+], 31860492400  [UniProt] hypothetical protein
12BF14641734607..1734708 [+], 10260492401  [UniProt]  [KEGG]hypothetical protein
13BF14651734787..1734960 [+], 17460492402  [UniProt]  [KEGG]hypothetical protein
14BF14661734971..1735108 [+], 13860492403  [UniProt]  [KEGG]hypothetical protein
15BF14671735345..1735842 [+], 49860492404  [UniProt]  [KEGG]conserved hypothetical protein
16BF14681735881..1736990 [+], 111060492405  [UniProt]  [KEGG]putative bacteriophage-related replication protein
17BF14691737010..1737567 [+], 55860492406  [UniProt]  [KEGG]putative transmembrane protein
18BF14701737593..1738504 [+], 91260492407  [UniProt]  [KEGG]putative DNA primase
19BF14711738565..1739293 [+], 72960492408  [UniProt]  [KEGG]conserved hypothetical protein
20BF14731739425..1740057 [+], 63360492409  [UniProt]  [KEGG]hypothetical protein
21BF14741740065..1740412 [+], 34860492410  [UniProt]  [KEGG]hypothetical protein
22BF14751740409..1740696 [+], 28860492411  [UniProt]  [KEGG]hypothetical protein
23BF14761740689..1740961 [+], 27360492412  [UniProt]  [KEGG]hypothetical protein
24BF14771741042..1741221 [+], 18060492413  [UniProt]  [KEGG]hypothetical protein
25BF14781741263..1741781 [+], 51960492414  [UniProt]  [KEGG]hypothetical protein
26BF14791741992..1742285 [+], 29460492415  [UniProt]  [KEGG]conserved hypothetical protein
27BF14801742282..1742824 [+], 54360492416  [UniProt]  [KEGG]conserved hypothetical protein
28BF14811742836..1744899 [+], 206460492417  [UniProt]  [KEGG]conserved hypothetical protein
29BF14821744886..1745767 [+], 88260492418  [UniProt]  [KEGG]hypothetical protein
30BF14831745785..1746747 [+], 96360492419  [UniProt]  [KEGG]hypothetical protein
31BF14841746798..1748402 [+], 160560492420  [UniProt]  [KEGG]hypothetical protein
32BF14851748421..1749218 [+], 79860492421  [UniProt]  [KEGG]hypothetical protein
33BF14861749233..1749541 [+], 30960492422  [UniProt]  [KEGG]putative transmembrane protein
34BF14871749538..1749879 [+], 34260492423  [UniProt]  [KEGG]putative transmembrane protein
35BF14881749908..1752268 [+], 236160492424  [UniProt]  [KEGG]putative conserved protein found in conjugate transposon
36BF14891752281..1752802 [+], 52260492425  [UniProt]  [KEGG]putative conserved TraI-like protein found in conjugate transposon
37BF14901752859..1753581 [+], 72360492426  [UniProt]  [KEGG]putative transmembrane protein
38BF14911753601..1754242 [+], 64260492427  [UniProt]  [KEGG]putative transmembrane protein
39BF14921754239..1755219 [+], 98160492428  [UniProt]  [KEGG]conserved hypothetical TraM-like protein found in conjugate transposon
40BF14931755413..1755556 [+], 14460492429  [UniProt]  [KEGG]hypothetical protein
41BF14941755676..1756212 [-], 53760492430  [UniProt]  [KEGG]putative transmembrane protein
42BF14951756227..1757381 [+], 115560492431  [UniProt]  [KEGG]conserved hypothetical TraN-like protein found in conjugate transposon
43BF14961757378..1757929 [+], 55260492432  [UniProt]  [KEGG]putative peptidase
44BF14971757913..1758254 [+], 34260492433  [UniProt]  [KEGG]hypothetical protein
45BF14981758251..1758559 [+], 30960492434  [UniProt]  [KEGG]putative DNA-binding protein
46BF14991758574..1760157 [+], 158460492435  [UniProt]  [KEGG]hypothetical protein
47BF15001760393..1762303 [-], 191160492436  [UniProt]  [KEGG]hypothetical protein
48BF15011762307..1762585 [-], 27960492437  [UniProt]  [KEGG]hypothetical protein
49BF15021762601..1763398 [-], 79860492438  [UniProt]  [KEGG]putative protein involved in partitioning
50BF15031763896..1764138 [+], 24360492439  [UniProt]  [KEGG]hypothetical protein
51BF15041764221..1765069 [+], 84960492440  [UniProt]  [KEGG]conserved hypothetical protein
52BF15051765180..1765341 [+], 16260492441  [UniProt]  [KEGG]hypothetical protein
53BF15061765459..1765644 [-], 18660492442  [UniProt]  [KEGG]hypothetical protein
54BF15071765682..1765825 [+], 14460492443  [UniProt]  [KEGG]hypothetical protein
55cbh1766098..1767093 [+], 99660492444  [UniProt]  [KEGG]putative choloylglycine hydrolase
56BF15091767406..1767795 [-], 39060492445  [UniProt]  [KEGG]hypothetical protein
57BF15101768167..1769735 [-], 156960492446  [UniProt]  [PDB]  [KEGG]conserved hypothetical exported protein
58BF15111769824..1771461 [-], 163860492447  [UniProt]  [KEGG]putative outer membrane protein
59BF15121771472..1774855 [-], 338460492448  [UniProt]  [KEGG]putative outer membrane protein
60BF15131774999..1775955 [-], 95760492449  [UniProt]  [KEGG]putative anti-sigma factor
61BF15141776039..1776626 [-], 58860492450  [UniProt]  [KEGG]putative RNA polymerase ECF-type sigma factor
62BF15161777187..1777591 [+], 40560492451  [UniProt]  [KEGG]hypothetical protein
63BF15171777597..1778913 [+], 131760492452  [UniProt]  [KEGG]conserved hypothetical protein
64BF15181779001..1782666 [+], 366660492453  [UniProt]  [KEGG]hypothetical protein
65BF15191782677..1783030 [+], 35460492454  [UniProt]  [KEGG]hypothetical protein
66mobC1783122..1784726 [+], 160560492455  [UniProt]  [KEGG]mobilisation protein C
67mobB1784743..1785693 [-], 95160492456  [UniProt]  [KEGG]mobilisation protein B
68mobA1785683..1786225 [-], 54360492457  [UniProt]  [KEGG]mobilisation protein A
69BF15231786511..1786861 [-], 35160492458  [UniProt]  [KEGG]hypothetical protein
70BF15241786839..1787783 [+], 94560492459  [UniProt]  [KEGG]conserved hypothetical protein
71BF15251787780..1788025 [+], 24660492460  [UniProt]  [KEGG]hypothetical protein
72BF15261788291..1788521 [+], 23160492461  [UniProt]  [KEGG]hypothetical protein
73BF15271788588..1789295 [+], 70860492462  [UniProt]  [KEGG]putative cation efflux protein
74satG1789308..1789925 [+], 61860492463  [UniProt]  [KEGG]putative acetyltransferaseVF
75rteA1789931..1791202 [+], 127260492464  [UniProt]  [KEGG]putative two component system sensor kinase
76rteB1791195..1792517 [+], 132360492465  [UniProt]  [KEGG]putative two-component system response regulatorVF
77BF15311792700..1793365 [-], 66660492466  [UniProt]  [KEGG]hypothetical protein
78BF15321793365..1794351 [-], 98760492467  [UniProt]  [KEGG]conserved hypothetical protein
79BF15331794681..1795403 [-], 72360492468  [UniProt]  [KEGG]putative integrase
80tnpA1795457..1797103 [+], 164760492469  [UniProt]  [KEGG]putative transposase for insertion sequence element IS21-like
81tnpB1797072..1797863 [+], 79260492470  [UniProt]  [KEGG]insertion sequence IS21-like putative ATP-binding protein
82BF15361797901..1798302 [+], 40260492471  [UniProt]  [KEGG]hypothetical protein
83BF15371798285..1799658 [-], 137460492472  [UniProt]  [KEGG]putative type I restriction-modification specificity protein
84BF15381799717..1800523 [+], 80760492473  [UniProt]  [KEGG]putative phage integrase/recombinase
85BF15391800648..1800782 [+], 13560492474  [UniProt]  [KEGG]hypothetical protein
86BF15401800966..1801529 [-], 56460492475  [UniProt]  [KEGG]hypothetical protein
87BF15411801548..1802183 [-], 63660492476  [UniProt]  [KEGG]hypothetical protein
88BF15421802180..1803445 [-], 126660492477  [UniProt]  [KEGG]hypothetical protein
89BF15431803501..1803707 [-], 20760492478  [UniProt]  [KEGG]hypothetical protein
90BF15441803918..1804280 [-], 36360492479  [UniProt]  [KEGG]hypothetical protein
91BF15451804751..1805701 [-], 95160492480 conserved hypothetical protein
92BF15461805817..1806164 [-], 34860492481 conserved hypothetical protein
93BF15471806235..1806465 [-], 23160492482 hypothetical protein
94BF15481806470..1806613 [+], 14460492483 hypothetical protein
95upfY1807211..1807810 [+], 60060492484 putative transcriptional regulator
96upfZ1807822..1808304 [+], 48360492485 putative transcriptional regulator
97rmlA11808337..1809227 [+], 89160492486 putative glucose-1-phosphate thymidyl transferase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins85Fasta
(1) Franco AA (2004). The Bacteroides fragilis pathogenicity island is contained in a putative novel conjugative transposon. J Bacteriol. 186(18):6077-92. [PudMed:15342577] experimental
 
experimental experimental literature