ICEberg
ICEberg ID156
NamepSE102
FamilyUnclassified
OrganismSaccharopolyspora erythraea NRRL 2338
Size (bp)11667
GC content [Genome] (%)67 [71]
Insertion sitetRNA-Ser
FunctionAminoglycoside resistance
Species that ICE can be transferred to-
Nucleotide SequenceAM420293 (complete ICE sequence in this genome)
Replicon chromosome (8212805 bp, Project:18489) [NC_009142]
Genome coordinates273573..285239
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of pSE102 form AM420293
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SACE_0233268605..269072 [+], 468133909473 CMP/dCMP deaminase, zinc-binding
2SACE_0234269255..269797 [+], 543133909474 RNA polymerase sigma-70 factor, ECF family
3SACE_0235270196..272004 [+], 1809133909475 putative large secreted protein
4SACE_0236272048..272542 [-], 495133909476 hypothetical protein
5SACE_0237272539..273294 [-], 756133909477 glycerophosphoryl diester phosphodiesterase
6int274405..275724 [-], 1320133909478  [UniProt]  [KEGG]integrase (recombinase)
7SACE_0240276265..276591 [-], 327133909479  [UniProt]  [KEGG]hypothetical protein
8SACE_0240a276588..277157 [-], 570133909480  [UniProt]  [KEGG]-
9SACE_0241277154..277384 [-], 231133909481  [UniProt]  [KEGG]hypothetical protein
10SACE_0242277667..279133 [-], 1467133909482  [UniProt]  [KEGG]hypothetical protein
11SACE_0244280123..280464 [-], 342133909483  [UniProt]  [KEGG]hypothetical protein
12SACE_0245280464..280841 [-], 378133909484  [UniProt]  [KEGG]hypothetical protein
13SACE_0246280845..281246 [-], 402133909485  [UniProt]  [KEGG]hypothetical protein
14SACE_0247281249..281494 [-], 246133909486  [UniProt]  [KEGG]hypothetical protein
15SACE_0248282076..282255 [-], 180133909487  [UniProt]  [KEGG]hypothetical protein
16SACE_0250283817..284437 [-], 621133909488  [UniProt]  [KEGG]aminoglycoside phosphotransferase
17SACE_0251285672..288122 [+], 2451133909489 putative DNA polymerase III gamma subunit
18SACE_0252288163..288393 [+], 231133909490 hypothetical protein
19SACE_0253288411..290231 [-], 1821133909491 peptidase S9, prolyl oligopeptidase active site region
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins11Fasta
(1) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PudMed:18295883] in_silico
 
in_silico in silico analysis literature