ICEberg
ICEberg ID158
NamepSE222
FamilyUnclassified
OrganismSaccharopolyspora erythraea NRRL 2338
Size (bp)20426
GC content [Genome] (%)66 [71]
Insertion sitetRNA-Ala(SACE_8019)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAM420293 (complete ICE sequence in this genome)
Replicon chromosome (8212805 bp, Project:18489) [NC_009142]
Genome coordinates1245945..1266370
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of pSE222 form AM420293
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SACE_11171241115..1242272 [+], 1158133910335 MFS superfamily, multidrug transport protein
2SACE_11181242850..1243089 [+], 240133910336 hypothetical protein
3SACE_11191243082..1244419 [+], 1338133910337 NADH dehydrogenase
4paaK-21244426..1245748 [-], 1323133910338 phenylacetate-coenzyme A ligase
5SACE_11211246070..1247272 [-], 1203133910339  [UniProt]  [KEGG]phage integrase
6SACE_11221247329..1248378 [-], 1050133910340  [UniProt]  [KEGG]DNA repair protein RadA domain protein
7SACE_11231248383..1249129 [-], 747133910341  [UniProt]  [KEGG]C-5 cytosine-specific DNA methylase
8SACE_11241249126..1250070 [-], 945133910342  [UniProt]  [KEGG]hypothetical protein
9ssb1250153..1250578 [-], 426133910343  [UniProt]  [KEGG]putative single-strand DNA-binding protein
10SACE_11261250604..1251008 [-], 405133910344  [UniProt]  [KEGG]hypothetical protein
11SACE_11271251033..1251209 [-], 177133910345  [UniProt]  [KEGG]hypothetical protein
12SACE_11281251238..1252122 [-], 885133910346  [UniProt]  [KEGG]hypothetical protein
13SACE_11291252362..1254686 [-], 2325133910347  [UniProt]  [KEGG]hypothetical protein
14SACE_11301254782..1256032 [-], 1251133910348  [UniProt]  [KEGG]hypothetical protein
15SACE_11311256029..1256241 [-], 213133910349  [UniProt]  [KEGG]hypothetical protein
16SACE_11321256238..1256573 [-], 336133910350  [UniProt]  [KEGG]hypothetical protein
17SACE_11331256663..1257136 [-], 474133910351  [UniProt]  [KEGG]DNA hydrolase with MutT domain
18SACE_11341257238..1257498 [-], 261133910352  [UniProt]  [KEGG]hypothetical protein
19SACE_11351257544..1257804 [-], 261133910353  [UniProt]  [KEGG]hypothetical protein
20SACE_11361257857..1258282 [-], 426133910354  [UniProt]  [KEGG]hypothetical protein
21SACE_11371258282..1258665 [-], 384133910355  [UniProt]  [KEGG]hypothetical protein
22SACE_11381258755..1258976 [-], 222133910356  [UniProt]  [KEGG]hypothetical protein
23SACE_11391259039..1259548 [+], 510133910357  [UniProt]  [KEGG]hypothetical protein
24SACE_11401259555..1259755 [-], 201133910358  [UniProt]  [KEGG]hypothetical protein
25SACE_11411259909..1261108 [+], 1200133910359  [UniProt]  [KEGG]transcriptional regulator, XRE family
26SACE_11421261162..1261635 [+], 474133910360  [UniProt]  [KEGG]flavoprotein
27SACE_11461266582..1267397 [-], 816133910361 alpha/beta hydrolase fold
28SACE_11471267492..1268466 [+], 975133910362 AraC-family transcriptional regulator
29SACE_11481268836..1269588 [+], 753133910363 hypothetical protein
30SACE_11491269961..1271256 [+], 1296133910364 putative sensor-like histidine kinase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins22Fasta
(1) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PudMed:18295883] in_silico
 
in_silico in silico analysis literature