ICEberg
ICEberg ID159
NameTnGBS2 (genomic island X)
FamilyUnclassified
OrganismStreptococcus agalactiae NEM316
Size (bp)33445
GC content [Genome] (%)38 [35]
Insertion siteIntergenic regions upstream of σ-A promoters
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNC_004368 (complete ICE sequence in this genome)
Replicon chromosome (2211485 bp, Project:334) [NC_004368]
Genome coordinates1163887..1197331
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of TnGBS2 (genomic island X) form NC_004368
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1gbs11141159215..1160450 [+], 123625011165 hypothetical protein
2gbs11151160549..1161337 [+], 78925011166 formate/nitrate transporter
3gbs11161161436..1162710 [-], 127525011167 xanthine permease
4gbs11171162710..1163291 [-], 58225011168 xanthine phosphoribosyltransferase
5gbs11181163887..1165182 [-], 129625011169  [UniProt]  [KEGG]hypothetical protein
6gbs11191165322..1165621 [-], 30025011170  [UniProt]  [KEGG]hypothetical protein
7gbs11201165632..1166879 [-], 124825011171  [UniProt]  [KEGG]hypothetical protein
8gbs11211166876..1168507 [-], 163225011172  [UniProt]  [KEGG]hypothetical protein
9gbs11221168479..1168853 [-], 37525011173  [UniProt]  [KEGG]hypothetical protein
10gbs11231168856..1169419 [-], 56425011174  [UniProt]  [KEGG]hypothetical protein
11gbs11241169422..1169718 [-], 29725011175  [UniProt]  [KEGG]hypothetical protein
12gbs11251169762..1170061 [-], 30025011176  [UniProt]  [KEGG]hypothetical protein
13gbs11261170113..1173349 [-], 323725011177  [UniProt]  [KEGG]hypothetical protein
14gbs11271173351..1173716 [-], 36625011178  [UniProt]  [KEGG]hypothetical protein
15gbs11281173758..1175803 [-], 204625011179  [UniProt]  [KEGG]hypothetical protein
16gbs11291175803..1176294 [-], 49225011180  [UniProt]  [KEGG]hypothetical protein
17gbs11301176316..1177098 [-], 78325011181  [UniProt]  [KEGG]hypothetical protein
18gbs11311177098..1177370 [-], 27325011182  [UniProt]  [KEGG]hypothetical protein
19gbs11321177390..1177995 [-], 60625011183  [UniProt]  [KEGG]hypothetical protein
20gbs11331178016..1180706 [-], 269125011184  [UniProt]  [KEGG]hypothetical protein
21gbs11341180739..1181269 [+], 53125011185  [UniProt]  [KEGG]hypothetical protein
22gbs11351181463..1183853 [-], 239125011186  [UniProt]  [KEGG]hypothetical protein
23gbs11361183795..1184154 [-], 36025011187  [UniProt]  [KEGG]hypothetical protein
24gbs11371184216..1184674 [-], 45925011188  [UniProt]  [KEGG]hypothetical protein
25gbs11381184735..1184962 [-], 22825011189  [UniProt]  [KEGG]hypothetical protein
26gbs11391185206..1185703 [-], 49825011190  [UniProt]  [KEGG]hypothetical protein
27gbs11401185717..1186469 [-], 75325011191  [UniProt]  [KEGG]hypothetical protein
28gbs11411186518..1187003 [-], 48625011192  [UniProt]  [KEGG]hypothetical protein
29gbs11421187109..1187336 [-], 22825011193  [UniProt]  [KEGG]hypothetical protein
30gbs11431187611..1190409 [-], 279925011194  [UniProt]  [KEGG]hypothetical protein
31gbs11441190476..1191186 [-], 71125011195  [UniProt]  [KEGG]hypothetical protein
32gbs11451191201..1193432 [-], 223225011196  [UniProt]  [KEGG]hypothetical protein
33gbs11461193449..1193748 [-], 30025011197  [UniProt]  [KEGG]hypothetical protein
34gbs11471194131..1194328 [-], 19825011198  [UniProt]  [KEGG]hypothetical protein
35gbs11481194325..1194510 [-], 18625011199  [UniProt]  [KEGG]hypothetical protein
36gbs11491194512..1195537 [-], 102625011200  [UniProt]  [KEGG]hypothetical protein
37gbs11501195539..1195703 [-], 16525011201  [UniProt]  [KEGG]hypothetical protein
38gbs11511195810..1196253 [-], 44425011202  [UniProt]  [KEGG]hypothetical protein
39gbs11521196519..1196776 [-], 25825011203  [UniProt]  [KEGG]hypothetical protein
40gbs11531196960..1197331 [-], 37225011204  [UniProt]  [KEGG]hypothetical protein
41gbs11541197445..1198428 [-], 98425011205 guanosine 5'-monophosphate oxidoreductase
42gbs11551198631..1199971 [-], 134125011206 hypothetical protein
43gbs11561200242..1200934 [+], 69325011207 hypothetical protein
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins36Fasta
(1) Brochet M; Da Cunha V; Couve E; Rusniok C; Trieu-Cuot P; Glaser P (2009). Atypical association of DDE transposition with conjugation specifies a new family of mobile elements. Mol Microbiol. 71(4):948-59. [PudMed:19183283] experimental
(2) Glaser P; Rusniok C; Buchrieser C; Chevalier F; Frangeul L; Msadek T; Zouine M; Couve E; Lalioui L; Poyart C; Trieu-Cuot P; Kunst F (2002). Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease. Mol Microbiol. 45(6):1499-513. [PudMed:12354221]
 
experimental experimental literature