ICEberg
ICEberg ID162
NamepNEM316-1 (island VIII)
FamilyTnGBS1
OrganismStreptococcus agalactiae NEM316
Size (bp)47070
GC content [Genome] (%)38 [35]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNC_004368 (complete ICE sequence in this genome)
Replicon chromosome (2211485 bp, Project:334) [NC_004368]
Genome coordinates1013025..1060094
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of pNEM316-1 (island VIII) form NC_004368
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1xerS1008358..1009428 [-], 107125011018 site-specific tyrosine recombinase XerS
2gbs09661009881..1011476 [+], 159625011019 hypothetical protein
3gbs09671011509..1012282 [-], 77425011020 hypothetical protein
4gbs09681012272..1012958 [-], 68725011021 satD protein
5gbs09691013361..1014689 [-], 132925011022  [UniProt]  [KEGG]hypothetical protein
6gbs09701014823..1015134 [-], 31225011023  [UniProt]  [KEGG]hypothetical protein
7gbs09711015139..1015522 [-], 38425011024  [UniProt]  [KEGG]hypothetical protein
8gbs09721015535..1015813 [-], 27925011025  [UniProt]  [KEGG]hypothetical protein
9gbs09731015810..1016628 [-], 81925011026  [UniProt]  [KEGG]hypothetical protein
10gbs09741016767..1017351 [-], 58525011027  [UniProt]  [KEGG]hypothetical protein
11gbs09751017365..1018702 [-], 133825011028  [UniProt]  [KEGG]hypothetical protein
12gbs09761018716..1018973 [-], 25825011029  [UniProt]  [KEGG]hypothetical protein
13gbs09771018993..1020942 [-], 195025011030  [UniProt]  [KEGG]hypothetical protein
14gbs09781020952..1021599 [-], 64825011031  [UniProt]  [KEGG]hypothetical protein
15gbs09791021599..1021904 [-], 30625011032  [UniProt]  [KEGG]hypothetical protein
16gbs09801022135..1022368 [-], 23425011033  [UniProt]  [KEGG]hypothetical protein
17gbs09811022425..1024632 [-], 220825011034  [UniProt]  [KEGG]hypothetical protein
18gbs09821024752..1025234 [-], 48325011035  [UniProt]  [KEGG]hypothetical protein
19gbs09831025334..1028483 [-], 315025011036  [UniProt]  [KEGG]hypothetical protein
20gbs09841028476..1028733 [-], 25825011037  [UniProt]  [KEGG]hypothetical protein
21gbs09851028961..1029392 [-], 43225011038  [UniProt]  [KEGG]hypothetical protein
22gbs09861029564..1032365 [-], 280225011039  [UniProt]  [KEGG]hypothetical protein
23gbs09871032417..1033139 [-], 72325011040  [UniProt]  [KEGG]hypothetical protein
24gbs09881033216..1035477 [-], 226225011041  [UniProt]  [KEGG]hypothetical protein
25gbs09891035492..1036574 [-], 108325011042  [UniProt]  [KEGG]hypothetical protein
26gbs09901036585..1036932 [-], 34825011043  [UniProt]  [KEGG]hypothetical protein
27gbs09911037024..1038943 [-], 192025011044  [UniProt]  [KEGG]hypothetical proteinVF
28gbs09921038858..1040606 [-], 174925011045  [UniProt]  [KEGG]hypothetical protein
29gbs09931040789..1045519 [-], 473125011046  [UniProt]  [KEGG]hypothetical protein
30gbs09941045538..1045795 [-], 25825011047  [UniProt]  [KEGG]hypothetical protein
31gbs09951045921..1048287 [-], 236725011048  [UniProt]  [KEGG]hypothetical protein
32gbs09961048341..1048799 [-], 45925011049  [UniProt]  [KEGG]hypothetical protein
33gbs09971048816..1049616 [-], 80125011050  [UniProt]  [KEGG]hypothetical proteinVF
34gbs09981049616..1049963 [-], 34825011051  [UniProt]  [KEGG]hypothetical protein
35gbs09991049956..1050273 [-], 31825011052  [UniProt]  [KEGG]hypothetical protein
36gbs10001050667..1050942 [-], 27625011053  [UniProt]  [KEGG]hypothetical protein
37gbs10011051065..1051907 [-], 84325011054  [UniProt]  [KEGG]hypothetical protein
38gbs10021051969..1052973 [-], 100525011055  [UniProt]  [KEGG]hypothetical protein
39gbs10031053052..1054008 [+], 95725011056  [UniProt]  [KEGG]hypothetical protein
40gbs10041054001..1054249 [-], 24925011057  [UniProt]  [KEGG]hypothetical protein
41gbs10051054264..1054407 [-], 14425011058  [UniProt]  [KEGG]hypothetical protein
42gbs10061054585..1054995 [-], 41125011059  [UniProt]  [KEGG]hypothetical protein
43gbs10071054988..1055437 [-], 45025011060  [UniProt]  [KEGG]hypothetical protein
44gbs10081055627..1056073 [-], 44725011061  [UniProt]  [KEGG]hypothetical protein
45gbs10091056073..1056501 [-], 42925011062  [UniProt]  [KEGG]hypothetical protein
46gbs03681056513..1056716 [-], 20425011063  [UniProt]  [KEGG]hypothetical protein
47gbs10101056972..1058465 [-], 149425011064  [UniProt]  [KEGG]hypothetical protein
48gbs10111058478..1058705 [-], 22825011065  [UniProt]  [KEGG]hypothetical protein
49gbs10121058698..1058817 [-], 12025011066  [UniProt]  [KEGG]hypothetical protein
50gbs10131058823..1058915 [-], 9325011067  [UniProt]  [KEGG]hypothetical protein
51gbs10141058921..1059250 [-], 33025011068  [UniProt]  [KEGG]hypothetical protein
52gbs10151059261..1059755 [-], 49525011069  [UniProt]  [KEGG]hypothetical protein
53gbs10161059792..1059980 [-], 18925011070  [UniProt]  [KEGG]hypothetical protein
54gbs10171060102..1061667 [-], 156625011071 hypothetical protein
55gbs10181061685..1062017 [-], 33325011072 DNA-binding protein
56gbs10191062106..1063419 [-], 131425011073 sensor histidine kinase CiaH
57gbs10201063403..1064083 [-], 68125011074 DNA-binding response regulator CiaR
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins49Fasta
(1) Brochet M; Da Cunha V; Couve E; Rusniok C; Trieu-Cuot P; Glaser P (2009). Atypical association of DDE transposition with conjugation specifies a new family of mobile elements. Mol Microbiol. 71(4):948-59. [PudMed:19183283] experimental
 
experimental experimental literature