ICEberg
ICEberg ID163
NameSLP1
FamilyUnclassified
OrganismStreptomyces coelicolor A3(2)
Size (bp)17204
GC content [Genome] (%)68 [72]
Insertion sitetRNA-Tyr
FunctionCleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA
Species that ICE can be transferred toStreptomyces lividans
Nucleotide SequenceNC_003888 (complete ICE sequence in this genome)
Replicon chromosome (8667507 bp, Project:242) [NC_003888]
Genome coordinates5038594..5055797
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
 

The gene information of SLP1 is not available.
ElementNo. of sequencesDownload
Nucleotide sequencesFasta
ProteinsFasta
(1) Liu G; Ou HY; Wang T; Li L; Tan H; Zhou X; Rajakumar K; Deng Z; He X (2010). Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA. PLoS Genet. 6(12):e1001253. [PudMed:21203499] experimental
(2) Brasch MA; Pettis GS; Lee SC; Cohen SN (1993). Localization and nucleotide sequences of genes mediating site-specific recombination of the SLP1 element in Streptomyces lividans. J Bacteriol. 175(10):3067-74. [PudMed:8387993] experimental
(3) Bibb MJ; Ward JM; Kieser T; Cohen SN; Hopwood DA (1981). Excision of chromosomal DNA sequences from Streptomyces coelicolor forms a novel family of plasmids detectable in Streptomyces lividans. Mol Gen Genet. 184(2):230-40. [PudMed:6948998] experimental
(4) Omer CA; Cohen SN (1984). Plasmid formation in Streptomyces: excision and integration of the SLP1 replicon at a specific chromosomal site. Mol Gen Genet. 196(3):429-38. [PudMed:6094971] experimental
(5) Lee SC; Omer CA; Brasch MA; Cohen SN (1988). Analysis of recombination occurring at SLP1 att sites. J Bacteriol. 170(12):5806-13. [PudMed:3056916] experimental
(6) Vogtli M; Cohen SN (1992). The chromosomal integration site for the Streptomyces plasmid SLP1 is a functional tRNA(Tyr) gene essential for cell viability. Mol Microbiol. 6(20):3041-50. [PudMed:1479893] experimental
 
experimental experimental literature