ICEberg
ICEberg ID174
NamePAGI-2
FamilyICEclc
OrganismPseudomonas aeruginosa C
Size (bp)104955
GC content [Genome] (%)65 [66]
Insertion sitetRNA-Gly
FunctionTransport of heavy metals and ions, cytochrome c biogenesis, mercury resistance
Species that ICE can be transferred to-
Nucleotide SequenceAF440523 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates27286..132240
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of PAGI-2 form AF440523
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1int27514..29445 [+], 193224461523  [UniProt] putative integrase
2ORF C229645..30301 [-], 65724461524  [UniProt] conserved hypothetical protein
3ORF C330421..30714 [+], 29424461525  [UniProt] conserved hypothetical protein
4bphR30736..31626 [-], 89124461567  [UniProt] putative transcriptional regulator
5ORF C531664..31987 [-], 32424461526  [UniProt] hypothetical protein
6ORF C632019..33395 [-], 137724461527  [UniProt] putative pyridine nucleotide-disulfide oxidoreductase, class I
7ORF C733438..34244 [-], 80724461528  [UniProt] conserved hypothetical membrane protein
8dsbG34335..35108 [-], 77424461529  [UniProt] putative thiol:disulfide interchange protein
9ORF C935111..35947 [-], 83724461530  [UniProt] putative thiol:disulfide interchange protein
10dsbD35947..37800 [-], 185424461531  [UniProt] putative thiol:disulfide interchange protein
11cycH37883..38764 [-], 88224461532  [UniProt] putative cytochrome c-type biogenesis protein CycH
12cycL38761..39216 [-], 45624461533  [UniProt] putative cytochrome c-type biogenesis protein CycL precursor
13ccmG39213..39737 [-], 52524461534  [UniProt] putative cytochrome C biogenesis protein CcmG
14ccmF39734..41695 [-], 196224461535  [UniProt] putative cytochrome C-type biogenesis protein CcmF
15cycJ / ccmE41699..42145 [-], 44724461536  [UniProt] putative cytochrome C-type biogenesis protein CycJ
16ccmD42129..42320 [-], 19224461537  [UniProt] putative heme exporter protein D
17ccmC42317..43054 [-], 73824461538  [UniProt] putative heme exporter protein CVF
18ccmB43067..43753 [-], 68724461539  [UniProt] putative cytochrome c maturation protein B
19ccmA43750..44361 [-], 61224461540  [UniProt] putative heme exporter protein AVF
20armR44542..45210 [+], 66924461541  [UniProt] putative response-regulator ArmRVF
21armS45207..46592 [+], 138624461542  [UniProt] putative sensor-kinase ArmS
22cutE46746..48344 [-], 159924461543  [UniProt] putative apolipoprotein N-acyltransferase
23ORF C2248369..50684 [-], 231624461544  [UniProt] putative metal transporter ATPase
24ORF C2350608..51705 [-], 109824461545  [UniProt] putative cytochrome c
25ORF C2451689..52507 [-], 81924461546  [UniProt] putative cytochrome c4
26fixO/ccoO52504..53145 [-], 64224461547  [UniProt] putative cytochrome-c oxidase
27fixN/ccoN53142..54698 [-], 155724461548  [UniProt] putative cytochrome-c oxidase
28ORF C2755217..56887 [-], 167124461549  [UniProt] conserved hypothetical protein
29ORF C2856936..57895 [-], 96024461550  [UniProt] conserved hypothetical protein
30ORF C2958002..58529 [-], 52824461551  [UniProt] conserved hypothetical protein
31ORF C3058552..58863 [-], 31224461552  [UniProt] putative transcriptional activator
32ORF C3159013..60239 [+], 122724461553  [UniProt] similar to metabolite transport protein
33ORF C3260316..60693 [+], 37824461554  [UniProt] conserved hypothetical protein
34ORF C3360804..61175 [+], 37224461555  [UniProt] hypothetical protein
35fenO61235..62029 [-], 79524461556  [UniProt] putative enoyl-CoA hydratase/isomerase
36ORF C3562441..63436 [+], 99624461557  [UniProt] putative transcriptional regulator
37ORF C3663484..65376 [-], 189324461558  [UniProt] conserved hypothetical protein
38ORF C3765692..66318 [+], 62724461559  [UniProt] conserved hypothetical proteinTA
39ORF C3866331..66963 [+], 63324461560  [UniProt] conserved hypothetical proteinTA
40ORF C3967037..67396 [+], 36024461561  [UniProt] conserved hypothetical protein
41ORF C4067412..68959 [-], 154824461562  [UniProt] hypothetical protein
42ORF C4168975..69331 [-], 35724461563  [UniProt] hypothetical protein
43ORF C4269328..70722 [-], 139524461564  [UniProt] hypothetical protein
44ORF C4370732..71682 [-], 95124461565  [UniProt] hypothetical protein
45ORF C4471679..72125 [-], 44724461566  [UniProt] hypothetical protein
46radC72290..72784 [-], 49524461569  [UniProt] putative DNA repair protein RadCVF
47ORF C4672960..73724 [-], 76524461568  [UniProt] conserved hypothetical protein
48ORF C4773749..76580 [-], 283224461570  [UniProt] hypothetical protein
49ORF C4876641..77081 [-], 44124461571  [UniProt] hypothetical protein
50ORF C4977062..78480 [-], 141924461572  [UniProt] hypothetical protein
51ORF C5078470..79381 [-], 91224461573  [UniProt] hypothetical protein
52ORF C5179378..80070 [-], 69324461574  [UniProt] hypothetical protein
53ORF C5280067..80465 [-], 39924461575  [UniProt] hypothetical protein
54ORF C5380478..80837 [-], 36024461576  [UniProt] hypothetical protein
55ORF C5480854..81087 [-], 23424461577  [UniProt] hypothetical protein
56ORF C5581084..81467 [-], 38424461578  [UniProt] hypothetical protein
57ORF C5681671..82141 [+], 47124461579  [UniProt] putative excisionaseTA
58ORF C5782138..82713 [+], 57624461580  [UniProt] conserved hypothetical proteinTA
59ORF C5882731..83645 [+], 91524461581  [UniProt] conserved hypothetical protein
60ORF C5983642..84112 [+], 47124461582  [UniProt] hypothetical protein
61ORF C6084109..84609 [+], 50124461583  [UniProt] hypothetical protein
62ORF C6184609..85511 [+], 90324461584  [UniProt] hypothetical protein
63ORF C6285316..86275 [+], 96024461585  [UniProt] hypothetical protein
64ORF C6386285..88909 [+], 262524461586  [UniProt] hypothetical protein
65ORF C6488950..89699 [-], 75024461587  [UniProt] hypothetical protein
66ORF C6589696..91885 [-], 219024461588  [UniProt] conserved hypothetical protein
67ORF C6691890..92438 [-], 54924461589  [UniProt] hypothetical protein
68ORF C6792435..93025 [-], 59124461590  [UniProt] conserved hypothetical protein
69ORF C6893007..93744 [-], 73824461591  [UniProt] hypothetical protein
70ORF C6993757..94401 [-], 64524461592  [UniProt] hypothetical protein
71ORF C7094398..94997 [-], 60024461593  [UniProt] conserved hypothetical proteinVF
72ORF C7195136..97415 [-], 228024461594  [UniProt] conserved hypothetical plasmid protein
73ORF C7297552..97857 [-], 30624461595  [UniProt] hypothetical protein
74ORF C7397947..98267 [-], 32124461596  [UniProt] hypothetical protein
75ORF C7498318..99427 [-], 111024461597  [UniProt] conserved hypothetical plasmid protein
76ORF C7599492..100139 [-], 64824461598  [UniProt] hypothetical protein
77ORF C76100216..100476 [-], 26124461599  [UniProt] conserved hypothetical protein
78ORF C77100493..100900 [-], 40824461600  [UniProt] conserved hypothetical protein
79ORF C78101005..101346 [-], 34224461601  [UniProt] conserved hypothetical plasmid protein
80ORF C79101441..102130 [-], 69024461602  [UniProt] conserved hypothetical protein
81ORF C80102225..103052 [-], 82824461603  [UniProt] conserved hypothetical protein; associated with oriT region on plasmidsVF
82ORF C81103198..104196 [-], 99924461604  [UniProt] conserved hypothetical protein
83ORF C82104414..104698 [-], 28524461605  [UniProt] conserved hypothetical protein
84ORF C83105006..105266 [-], 26124461606  [UniProt] conserved hypothetical protein
85merA106352..108040 [-], 168924461607  [UniProt] mercuric (Hg(II)) reductase
86merP108051..108338 [-], 28824461608  [UniProt] periplasmic mercuric ion binding protein MerP
87merT108351..108701 [-], 35124461609  [UniProt] mercuric transport protein MerT
88merR108773..109180 [+], 40824461610  [UniProt] organomercurial resistance regulatory protein MerR
89ORF C89109442..110266 [-], 82524461611  [UniProt] hypothetical protein
90ORF C90110555..110833 [-], 27924461612  [UniProt] hypothetical protein
91ORF C91110931..111668 [-], 73824461613  [UniProt] hypothetical protein
92ORF C92111752..112489 [-], 73824461614  [UniProt] hypothetical protein
93ORF C93112621..113013 [-], 39324461615  [UniProt] conserved hypothetical protein
94ORF C94113035..113448 [-], 41424461616  [UniProt] conserved hypothetical protein
95ORF C95113585..113896 [-], 31224461617  [UniProt] conserved hypothetical protein
96lspA114233..114733 [-], 50124461618  [UniProt] putative lipoprotein signal peptidase LspA
97ORF C97114737..117649 [-], 291324461619  [UniProt] putative metal-transporting P-type ATPase
98ORF C98117741..118139 [+], 39924461620  [UniProt] putative transcriptional regulator
99ORF C99118594..118830 [-], 23724461621  [UniProt] hypothetical protein
100ORF C100119215..119850 [+], 63624461622  [UniProt] putative integral membrane protein / transporter
101topB120574..122604 [-], 203124461623  [UniProt] putative DNA topoisomerase III
102ssb122888..123328 [-], 44124461624  [UniProt] putative single-stranded DNA binding protein
103ORF C103123402..123929 [-], 52824461625  [UniProt] conserved hypothetical protein
104ORF C104123926..124717 [-], 79224461626  [UniProt] conserved hypothetical protein
105ORF C105125147..126385 [-], 123924461627  [UniProt] conserved hypothetical protein
106ORF C106126389..126949 [-], 56124461628  [UniProt] conserved hypothetical protein
107ORF C107126964..128643 [-], 168024461629  [UniProt] conserved hypothetical protein
108soj128889..129764 [-], 87624461630  [UniProt] putative chromosome partitioning related protein
109ORF C109129807..130028 [-], 22224461631  [UniProt] phage-related proteinVF
110ORF C110130138..130884 [-], 74724461632  [UniProt] conserved hypothetical protein
111ORF C111131335..131835 [+], 50124461633  [UniProt] hypothetical protein
112rebB1132450..132770 [-], 32124461634 putative protein associated with synthesis and assembly of refractile inclusion bodies
113rebB2132833..133153 [-], 32124461635 putative protein associated with synthesis and assembly of refractile inclusion bodies
114ORF C/SG114133304..133849 [-], 54624461637 hypothetical protein
115ORF C/SG115133903..134142 [-], 24024461638 hypothetical protein
116ORF C/SG116134371..136512 [-], 214224461639 hypothetical protein
117ORF C/SG117136563..137189 [-], 62724461640 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins111Fasta
(1) Larbig KD; Christmann A; Johann A; Klockgether J; Hartsch T; Merkl R; Wiehlmann L; Fritz HJ; Tummler B (2002). Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone. J Bacteriol. 184(23):6665-80. [PudMed:12426355] experimental
 
experimental experimental literature