ICEberg
ICEberg
ICEberg ID178
NameICEPaeC3719-1
FamilyPAPI-1
OrganismPseudomonas aeruginosa C3719
Size (bp)78296
GC content [Genome] (%)62
Insertion sitetRNA-Lys (Lys47)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNW_001999377 (complete ICE sequence in this contig)
Replicon-
Coordinates5416255..5494550
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEPaeC3719-1 form NW_001999377
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1PACG_048325412007..5412384 [-], 378194549655 hypothetical protein
2PACG_048335412486..5413511 [-], 1026194549656 RNA 3'-terminal phosphate cyclase
3PACG_048345413508..5414320 [-], 813194549657 hypothetical protein
4PACG_048355414357..5415571 [-], 1215194549658 hypothetical protein
5PACG_048365415627..5416772 [-], 1146194549659 hypothetical protein
6PACG_048375417432..5419027 [+], 1596194549660 transcriptional regulator RtcR
7PACG_048385419083..5419637 [+], 555194549661 hypothetical protein
8PACG_048395419631..5421487 [-], 1857194549662 hypothetical protein
9PACG_048405421547..5422035 [-], 489194549663 hypothetical protein
10PACG_048415422270..5422596 [+], 327194549664 hypothetical protein
11PACG_048425422695..5425063 [+], 2369194549665 hypothetical protein
12PACG_048435426077..5426681 [+], 605194549666 peptidyl-prolyl cis-trans isomerase FklB
13PACG_048445426754..5428781 [-], 2028194549667 hypothetical protein
14PACG_048465429574..5430542 [-], 969194549668 octaprenyl-diphosphate synthase
15PACG_048475430783..5431094 [+], 312194549669 50S ribosomal protein L21
16PACG_048485431118..5431375 [+], 258194549670 50S ribosomal protein L27
17PACG_048495431517..5432737 [+], 1221194549671 GTP-binding protein Obg
18PACG_048505432808..5433926 [+], 1119194549672 glutamate 5-kinase
19PACG_048515433938..5434402 [+], 465194549673 hypothetical protein
20PACG_048525434469..5434744 [-], 276194549674 30S ribosomal protein S20
21PACG_048535435028..5436566 [+], 1539194549675 hypothetical protein
22PACG_048545436663..5437601 [+], 939194549676 riboflavin kinase/FAD synthase
23PACG_048555437625..5440456 [+], 2832194549677 isoleucyl-tRNA synthetase
24PACG_048565440449..5440958 [+], 510194549678 prolipoprotein signal peptidase
25PACG_048575440951..5441391 [+], 441194549679 hypothetical protein
26PACG_048585441477..5442421 [+], 945194549680 LytB protein
27PACG_048595442490..5442915 [-], 426194549681 type 4 fimbrial biogenesis protein PilE
28PACG_048605442912..5443244 [-], 333194549682 type 4 fimbrial biogenesis protein PilY2
29PACG_048615443241..5446753 [-], 3513194549683 type 4 fimbrial biogenesis protein PilY1
30PACG_048625446731..5447336 [-], 606194549684 type 4 fimbrial biogenesis protein PilX
31PACG_048635447333..5448187 [-], 855194549685 type 4 fimbrial biogenesis protein PilW
32PACG_048645448157..5448681 [-], 525194549686 Type 4 fimbrial biogenesis protein PilV
33PACG_048655448691..5449179 [-], 489194549687 FimU
34PACG_048665449302..5449802 [-], 501194549688 FimT
35PACG_048675449960..5451036 [+], 1077194549689 hypothetical protein
36PACG_048685451082..5452419 [-], 1338194549690 two-component response regulator PilR
37PACG_048695452434..5454026 [-], 1593194549691 two-component sensor PilS
38PACG_048705454418..5455443 [-], 1026194549692 competence protein ComL
39PACG_048715455589..5456551 [+], 963194549693 pseudouridine synthase
40PACG_048725456548..5457276 [+], 729194549694 hypothetical protein
41PACG_048735457432..5459996 [+], 2565194549695 ClpB protein
42PACG_048755460848..5462140 [-], 1293194549696 integrase
43PACG_048765462137..5464056 [-], 1920194549697 hypothetical protein
44PACG_048775464929..5465279 [-], 351194549698 plasmid stablization protein
45PACG_048785465283..5465555 [-], 273194549699 hypothetical protein
46PACG_048795466023..5467537 [-], 1515194549700 hypothetical protein
47PACG_048805467534..5467881 [-], 348194549701 hypothetical protein
48PACG_048815467881..5469263 [-], 1383194549702 hypothetical protein
49PACG_048825469281..5470219 [-], 939194549703 hypothetical protein
50PACG_048835470219..5470650 [-], 432194549704 hypothetical protein
51PACG_048845470859..5471077 [+], 219194549705 hypothetical protein
52PACG_048855471074..5471733 [-], 660194549706 hypothetical protein
53PACG_048865471730..5472014 [-], 285194549707 hypotehtical protein
54PACG_048875472011..5474953 [-], 2943194549708 hypothetical protein
55PACG_048885474953..5475396 [-], 444194549709 hypothetical protein
56PACG_048895475374..5476879 [-], 1506194549710 hypothetical protein
57PACG_048905476863..5477747 [-], 885194549711 hypothetical protein
58PACG_048915477744..5478403 [-], 660194549712 hypothetical protein
59PACG_048925478400..5478786 [-], 387194549713 hypothetical protein
60PACG_048935478797..5479153 [-], 357194549714 hypothetical protein
61PACG_048945479171..5479404 [-], 234194549715 hypothetical protein
62PACG_048955479407..5479766 [-], 360194549716 hypothetical protein
63PACG_048965479839..5480144 [-], 306194549717 hypothetical protein
64PACG_048975480253..5481734 [-], 1482194549718 hypothetical protein
65PACG_048985481745..5482491 [-], 747194549719 hypothetical protein
66PACG_048995482491..5484722 [-], 2232194549720 hypothetical protein
67PACG_049005484726..5484995 [-], 270194549721 dTDP-D-glucose 4,6-dehydratase
68PACG_049015485004..5485504 [-], 501194549722 hypothetical protein
69PACG_049025485501..5486082 [-], 582194549723 hypothetical protein
70PACG_049035486067..5486822 [-], 756194549724 hypothetical protein
71PACG_049045486833..5487522 [-], 690194549725 hypothetical protein
72PACG_049055489311..5489514 [-], 204194549726 hypothetical protein
73PACG_049065489511..5490107 [-], 597194549727 hypothetical protein
74PACG_049075490092..5490682 [-], 591194549728 hypothetical protein
75PACG_049085491563..5492246 [-], 684194549729 hypothetical protein
76PACG_049095492351..5492782 [+], 432194549730 ultraviolet light resistance protein A
77PACG_049105492769..5494043 [+], 1275194549731 ultraviolet light resistance protein B, interruption-C
78PACG_049115494727..5496982 [-], 2256194549732 hypothetical protein
79PACG_049125497081..5498526 [-], 1446194549733 hypothetical protein
80PACG_049135498556..5499161 [-], 606194549734 hypothetical protein
81PACG_049145499253..5499507 [-], 255194549735 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins0Fasta
Identified as part of this study from NW_001999377