ICEberg
ICEberg ID194
NameICE(Tn4371)6035
FamilyTn4371
OrganismCongregibacter litoralis KT71
Size (bp)50661
GC content [Genome] (%)59.52
Insertion siteTTTTTTAT
FunctionAcriflavine resistance
Species that ICE can be transferred to-
Nucleotide SequenceNZ_AAOA01000008 (complete ICE sequence in this contig)
Replicon-
Coordinates133371..184030
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICE(Tn4371)6035 form NZ_AAOA01000008
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1KT71_12345130887..133283 [+], 239788705869 TonB-dependent receptor
2KT71_12350133554..134753 [+], 120088705870  [UniProt] prophage integrase
3KT71_12355134890..135264 [+], 37588705871  [UniProt] Protein of unknown function DUF1044TA
4KT71_12360135254..135559 [+], 30688705872  [UniProt] DNA-binding proteinTA
5KT71_12365135726..136403 [+], 67888705873  [UniProt] hypothetical protein
6KT71_12370136544..137731 [+], 118888705874  [UniProt] hypothetical protein
7KT71_12375137777..138565 [-], 78988705875  [UniProt] membrane protein
8KT71_12380138572..139474 [-], 90388705876  [UniProt] hypothetical protein
9KT71_12385139563..140750 [+], 118888705877  [UniProt] hypothetical protein
10KT71_12390140747..143002 [+], 225688705878  [UniProt] hypothetical protein
11KT71_12395143048..144118 [+], 107188705879  [UniProt] hypothetical protein
12KT71_12400144486..144995 [+], 51088705880  [UniProt] radC-like protein yeeSVF
13KT71_12405145158..146321 [-], 116488705881  [UniProt] hypothetical protein
14KT71_12410146611..148413 [-], 180388705882  [UniProt] hypothetical protein
15KT71_12415148410..149585 [-], 117688705883  [UniProt] hypothetical protein
16KT71_12420149713..150000 [-], 28888705884  [UniProt] transcription regulator protein
17KT71_12425150286..150615 [+], 33088705885  [UniProt] hypothetical protein
18KT71_12430150938..151735 [+], 79888705886  [UniProt] hypothetical protein
19KT71_12435151804..152103 [+], 30088705887  [UniProt] hypothetical protein
20KT71_12440152130..152975 [+], 84688705888  [UniProt] replication protein RepA
21KT71_12445153262..153900 [+], 63988705889  [UniProt] protein containing CobQ/CobB/MinD/ParA nucleotid e binding domain
22KT71_12450153897..154148 [+], 25288705890  [UniProt] hypothetical protein
23KT71_12455154145..154678 [+], 53488705891  [UniProt] conserved hypothetical protein, secreted
24KT71_12460154774..155262 [+], 48988705892  [UniProt] Conjugal transfer protein traF precursor
25KT71_12465155675..157669 [+], 199588705893  [UniProt] hypothetical protein
26KT71_12470157753..158211 [-], 45988705894  [UniProt] 4-hydroxyphenylacetate 3-monooxygenase, reductase component
27KT71_12475158275..159162 [-], 88888705895  [UniProt] hypothetical protein
28KT71_12480159146..160093 [-], 94888705896  [UniProt] Bacterial luciferase
29KT71_12485160177..161340 [-], 116488705897  [UniProt] Transposase, IS204/IS1001/IS1096/IS1165
30KT71_12490161467..161859 [-], 39388705898  [UniProt] conserved hypothetical protein, membrane
31KT71_12495162613..162927 [+], 31588705899  [UniProt] transcriptional regulator, ArsR family protein
32KT71_12500163192..163848 [-], 65788705900  [UniProt] Transcriptional regulator, TetR family protein
33KT71_12505163939..165141 [+], 120388705901  [UniProt] Acriflavine resistance protein A (Precursor)
34KT71_12510165095..168328 [+], 323488705902  [UniProt] acriflavine resistance protein B
35KT71_12515168393..169922 [+], 153088705903  [UniProt] RND efflux system, outer membrane lipoprotein
36KT71_12520169937..170881 [+], 94588705904  [UniProt] transcriptional regulator, LysR family protein
37KT71_12525170878..171138 [+], 26188705905  [UniProt] secreted protein
38KT71_12530171375..173372 [+], 199888705906  [UniProt] Conjugal transfer protein traG
39KT71_12535173369..173857 [+], 48988705907  [UniProt] Helix-turn-helix protein, CopG family protein
40KT71_12540173854..174924 [+], 107188705908  [UniProt] conjugal transfer protein trbB
41KT71_12545174975..175307 [+], 33388705909  [UniProt] Conjugal transfer protein TrbC
42KT71_12550175304..175573 [+], 27088705910  [UniProt] conjugal transfer trbD transmembrane protein
43KT71_12555175586..178036 [+], 245188705911  [UniProt] Conjugal transfer protein trbE precursor
44KT71_12560178033..178776 [+], 74488705912  [UniProt] Conjugal transfer protein trbJ (Precursor)
45KT71_12565178789..179103 [+], 31588705913  [UniProt] hypothetical protein
46KT71_12570179100..180488 [+], 138988705914  [UniProt] TrbL/VirB6 plasmid conjugal transfer protein
47KT71_12575180506..181210 [+], 70588705915  [UniProt] Conjugal transfer protein trbF
48KT71_12580181207..182211 [+], 100588705916  [UniProt] Conjugal transfer protein TrbG/VirB9/CagX
49KT71_12585182214..183491 [+], 127888705917  [UniProt] Bacterial conjugation TrbI-like protein
50KT71_12590183488..183733 [+], 24688705918  [UniProt] hypothetical protein
51KT71_12595184148..184408 [-], 26188705919 secreted protein
52KT71_12600184500..185876 [-], 137788705920 protein containing Metallo-dependent hydrolase domain
53KT71_12605185967..187469 [+], 150388705921 Sulfatase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins49Fasta
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 9:242. [PudMed:19941653] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature