ICEberg
ICEberg ID205
NameICE(Tn4371)6070
FamilyTn4371
OrganismPseudomonas aeruginosa PACS171b
Size (bp)42156
GC content [Genome] (%)64.12
Insertion siteTTTTTTAT
FunctionGlyoxalase/bleomycin resistance; arsenical resistance
Species that ICE can be transferred to-
Nucleotide SequenceEU595746 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1853..44008
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICE(Tn4371)6070 form EU595746
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1PACL_02342150..2395 [-], 246187939885  [UniProt] hypothetical protein
2PACL_02352392..3669 [-], 1278187939886  [UniProt] type IV secretory pathway protein
3cagX3672..4676 [-], 1005187939887  [UniProt] type IV secretory pathway protein
4trbF4673..5377 [-], 705187939888  [UniProt] type IV secretory pathway protein
5trbL5395..6783 [-], 1389187939889  [UniProt] type IV secretory pathway protein
6PACL_02396780..7094 [-], 315187939890  [UniProt] hypothetical protein
7PACL_02407107..7850 [-], 744187939891  [UniProt] conjugal transfer/entry exclusion protein
8cagE7847..10297 [-], 2451187939892  [UniProt] type IV secretory pathway protein
9trbD10310..10579 [-], 270187939893  [UniProt] type IV secretory pathway protein
10trbC10576..10968 [-], 393187939894  [UniProt] type IV secretory pathway protein
11PACL_024410965..12035 [-], 1071187939895  [UniProt] type II/IV secretion system protein
12PACL_024512032..12520 [-], 489187939896  [UniProt] hypothetical protein
13traG12517..14523 [-], 2007187939897  [UniProt] type IV secretory pathway protein
14PACL_024714759..15031 [-], 273187939898  [UniProt] hypothetical protein
15PACL_024815059..15970 [-], 912187939899  [UniProt] transcription regulator
16PACL_024916116..16208 [-], 93187939900  [UniProt] hypothetical protein
17PACL_025016212..17075 [-], 864187939901  [UniProt] universal stress protein family protein
18PACL_025117090..18568 [-], 1479187939902  [UniProt] sulfate permease
19PACL_025218881..20869 [-], 1989187939903  [UniProt] type IV secretory pathway protein
20traF21318..21917 [-], 600187939904  [UniProt] type IV secretory pathway protein
21PACL_025421914..22753 [-], 840187939905  [UniProt] conserved hypothetical protein
22PACL_025522728..23366 [-], 639187939906  [UniProt] chromosome partitioning protein
23PACL_025623632..24477 [-], 846187939907  [UniProt] plasmid replication initiator protein
24PACL_025724504..24845 [-], 342187939908  [UniProt] conserved hypothetical protein
25PACL_025824903..25673 [-], 771187939909  [UniProt] conserved hypothetical protein
26PACL_025926017..26568 [-], 552187939910  [UniProt] hypothetical protein
27PACL_026026687..26980 [+], 294187939911  [UniProt] transcription regulator protein
28PACL_026127299..27652 [-], 354187939912  [UniProt] conserved hypothetical protein
29PACL_026228698..28973 [-], 276187939913  [UniProt] heavy metal transport protein
30PACL_026328986..29333 [-], 348187939914  [UniProt] mercury ion transport protein
31PACL_026429409..29807 [+], 399187939915  [UniProt] MerR family regulatory protein
32PACL_026529938..30147 [-], 210187939916  [UniProt] conserved hypothetical protein
33PACL_026630210..32255 [-], 2046187939917  [UniProt] hypothetical protein
34PACL_026732336..33163 [-], 828187939918  [UniProt] conserved hypothetical proteinVF
35PACL_026833867..34145 [-], 279187939919  [UniProt] hypothetical protein
36PACL_026934211..34561 [-], 351187939920  [UniProt] hypothetical protein
37PACL_027034931..35260 [+], 330187939921  [UniProt] bacterial regulatory protein
38PACL_027135273..35719 [+], 447187939922  [UniProt] glyoxalase/bleomycin resistance protein
39PACL_027235731..36228 [+], 498187939923  [UniProt] protein-tyrosine-phosphatase
40PACL_027336270..36629 [+], 360187939924  [UniProt] arsenical resistance operon repressor protein
41PACL_027436643..38409 [+], 1767187939925  [UniProt] arsenical resistance efflux pump protein
42PACL_027538439..39518 [+], 1080187939926  [UniProt] arsenical resistance-3 family protein
43PACL_027639533..39955 [+], 423187939927  [UniProt] arsenate reductase
44PACL_027739933..40670 [+], 738187939928  [UniProt] NADPH-dependent FMN reductase
45PACL_027840712..41221 [-], 510187939929  [UniProt] RadC family DNA repair proteinVF
46PACL_027941562..42578 [-], 1017187939930  [UniProt] conserved hypothetical protein
47PACL_028042623..43825 [-], 1203187939931  [UniProt] phage integrase
48PACL_028144332..45015 [+], 684187939932 transcriptional regulator Dnr
49PACL_028245039..45191 [-], 153187939933 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins47Fasta
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 9:242. [PudMed:19941653] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature