ICEberg
ICEberg ID207
NameAICEFranean5323
FamilyUnclassified
OrganismFrankia sp. EAN1pec
Size (bp)19319
GC content [Genome] (%)68 [71]
Insertion sitetRNA-Arg (Franean1_R0041)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP000820 (complete ICE sequence in this genome)
Replicon chromosome (8982042 bp, Project:13915) [NC_009921]
Genome coordinates6413625..6432943
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of AICEFranean5323 form CP000820
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Franean1_53206408825..6411098 [-], 2274158112481 conserved hypothetical protein
2Franean1_53216411152..6412069 [-], 918158112482 single-strand binding protein
3Franean1_53226412433..6413314 [+], 882158112483 aldo/keto reductase
4Franean1_53236413690..6414958 [-], 1269158112484  [UniProt]  [KEGG]integrase family protein
5Franean1_53246415205..6415504 [-], 300158112485  [UniProt]  [KEGG]conserved hypothetical protein
6Franean1_53256415640..6415825 [-], 186158112486  [UniProt]  [KEGG]DNA binding domain, excisionase family
7Franean1_53266415855..6417573 [-], 1719158112487  [UniProt]  [KEGG]replication initiator protein
8Franean1_53276417791..6419362 [-], 1572158112488  [UniProt]  [KEGG]cell divisionFtsK/SpoIIIE
9Franean1_53286419480..6419782 [-], 303158112489  [UniProt]  [KEGG]conserved hypothetical protein
10Franean1_53296419779..6420186 [-], 408158112490  [UniProt]  [KEGG]conserved hypothetical protein
11Franean1_53306420372..6420830 [+], 459158112491  [UniProt]  [KEGG]putative transcriptional regulator
12Franean1_53316421387..6421848 [-], 462158112492  [UniProt]  [KEGG]conserved hypothetical protein
13Franean1_53326422023..6423201 [+], 1179158112493  [UniProt]  [KEGG]putative transcriptional regulator, XRE family
14Franean1_53336423208..6423678 [+], 471158112494  [UniProt]  [KEGG]NUDIX hydrolase
15Franean1_53346423666..6424214 [-], 549158112495  [UniProt]  [KEGG]metal dependent phosphohydrolase
16Franean1_53356424617..6430769 [-], 6153158112496  [UniProt]  [KEGG]peptidase C14 caspase catalytic subunit p20
17Franean1_53366431591..6432943 [-], 1353158112497  [UniProt]  [KEGG]conserved hypothetical protein
18Franean1_53376433394..6434551 [+], 1158158112498 TIR protein
19Franean1_53386434754..6435809 [-], 1056158112499 ABC transporter related
20Franean1_53396435823..6437352 [-], 1530158112500 binding-protein-dependent transport systems inner membrane component
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins14Fasta
(1) te Poele EM; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative elements. Antonie Van Leeuwenhoek. 94(1):127-43. [PudMed:18523858]