ICEberg
ICEberg ID216
NameAICEStrop0058
FamilyUnclassified
OrganismSalinispora tropica CNB-440
Size (bp)14261
GC content [Genome] (%)70 [69]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP000667 (complete ICE sequence in this genome)
Replicon chromosome (5183331 bp, Project:16342) [NC_009380]
Genome coordinates67688..81948
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of AICEStrop0058 form CP000667
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Strop_005564800..65813 [+], 1014145301958 NLP/P60 protein
2Strop_005665961..66539 [-], 579145301959 dCTP deaminase
3Strop_005766617..67150 [+], 534145301960 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
4Strop_005867688..68875 [-], 1188145301961  [UniProt]  [KEGG]phage integrase family protein
5Strop_005968878..69135 [-], 258145301962  [UniProt]  [KEGG]DNA binding domain, excisionase family
6Strop_006069373..70479 [-], 1107145301963  [UniProt]  [KEGG]hypothetical protein
7Strop_006170484..71194 [-], 711145301964  [UniProt]  [KEGG]C-5 cytosine-specific DNA methylase
8Strop_006271191..72366 [-], 1176145301965  [UniProt]  [KEGG]hypothetical protein
9Strop_006372707..74860 [-], 2154145301966  [UniProt]  [KEGG]hypothetical protein
10Strop_006474857..76410 [-], 1554145301967  [UniProt]  [KEGG]hypothetical protein
11Strop_006576407..76607 [-], 201145301968  [UniProt]  [KEGG]hypothetical protein
12Strop_006676609..77112 [-], 504145301969  [UniProt]  [KEGG]hypothetical protein
13Strop_006777206..78267 [-], 1062145301970  [UniProt]  [KEGG]hypothetical protein
14Strop_006878264..78575 [-], 312145301971  [UniProt]  [KEGG]hypothetical protein
15Strop_006978664..79329 [-], 666145301972  [UniProt]  [KEGG]NUDIX hydrolase
16Strop_007079326..79703 [-], 378145301973  [UniProt]  [KEGG]hypothetical protein
17Strop_007179700..79951 [-], 252145301974  [UniProt]  [KEGG]hypothetical protein
18Strop_007280381..81247 [+], 867145301975  [UniProt]  [KEGG]transcriptional regulator, GntR family
19Strop_007381244..81948 [+], 705145301976  [UniProt]  [KEGG]HAD-superfamily hydrolase, subfamily IA, variant 3
20Strop_007482600..82953 [-], 354145301977 hypothetical protein
21Strop_007583109..83399 [-], 291145301978 hypothetical protein
22Strop_007683609..84655 [-], 1047145301979 hypothetical protein
23Strop_007784655..85152 [-], 498145301980 RNA polymerase, sigma-24 subunit, ECF subfamily
24Strop_007885513..86937 [-], 1425145301981 aldehyde dehydrogenase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins16Fasta
(1) te Poele EM; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative elements. Antonie Van Leeuwenhoek. 94(1):127-43. [PudMed:18523858]