ICEberg
ICEberg ID225
NameICEA(5632)-II
FamilyICEA5632
OrganismMycoplasma agalactiae 5632
Size (bp)27171
GC content [Genome] (%)27 [30]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFP671138 (complete ICE sequence in this genome)
Replicon-
Genome coordinates343591..370761
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICEA(5632)-II form FP671138
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1MAGa2960338596..340806 [+], 2211290752539 Putative transmembrane protein
2MAGa2970340838..343414 [+], 2577290752540 Conserved hypothetical protein, predictedlipoprotein
3MAGa2980343591..344385 [+], 795290752541  [UniProt] CDS1
4MAGa2990345625..346638 [+], 1014290752542  [UniProt] CDSA
5MAGa3000346644..347048 [+], 405290752543  [UniProt] CDS12
6MAGa3010347064..347729 [+], 666290752544  [UniProt] CDS11
7MAGa3030347766..348218 [+], 453290752545  [UniProt] CDSB
8MAGa3040348307..348867 [+], 561290752546  [UniProt] CDSC
9MAGa3050348920..349573 [+], 654290752547  [UniProt] CDSD
10MAGa3060349668..351680 [+], 2013290752548  [UniProt] CDS5
11MAGa3070351730..352710 [+], 981290752549  [UniProt] CDS7
12MAGa3080352859..353113 [+], 255290752550  [UniProt] CDS13
13MAGa3090353116..353481 [+], 366290752551  [UniProt] CDS15
14MAGa3100353486..354109 [+], 624290752552  [UniProt] CDS16 N terminal part
15MAGa3110354073..354561 [+], 489290752553  [UniProt] C treminal part of CDS16 Previouslycharacterized CDS (tr Q1IH56); Marenda M., Barbe V.,Gourgues G., Mangenot S., Sagne E., Citti C., A newintegrative conjugative element occurs in Mycoplasmaagalactiae as chromosomal and free circular forms. J.Bacteriol. 188:4137 4141(2006).)
16MAGa3120354708..355148 [+], 441290752554  [UniProt] CDS27
17MAGa3130355135..357921 [+], 2787290752555  [UniProt] CDS17
18MAGa3140357927..362480 [+], 4554290752556  [UniProt] CDS19
19MAGa3150362855..363307 [+], 453290752557  [UniProt] CDSE
20MAGa3160363625..365199 [+], 1575290752558  [UniProt] CDS14
21MAGa3170365325..366587 [-], 1263290752559  [UniProt] CDSF
22MAGa3180366758..367111 [-], 354290752560  [UniProt] Hypothetical protein
23MAGa3190367202..368041 [-], 840290752561  [UniProt] CDSG
24MAGa3200368232..368903 [-], 672290752562  [UniProt] CDSH
25MAGa3210368890..369084 [-], 195290752563  [UniProt] -
26MAGa3220369688..370761 [+], 1074290752564  [UniProt] CDS22
27MAGa3230371003..373219 [+], 2217290752565 Conserved hypothetical protein, predictedtransmembrane protein
28MAGa3240373427..375715 [+], 2289290752566 Putative transmembrane protein
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
(1) Nouvel LX; Sirand-Pugnet P; Marenda MS; Sagne E; Barbe V; Mangenot S; Schenowitz C; Jacob D; Barre A; Claverol S; Blanchard A; Citti C (2010). Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity. BMC Genomics. 11:86. [PudMed:20122262]