ICEberg
ICEberg ID230
NameICESp23FST81
FamilyTn5253
OrganismStreptococcus pneumoniae ATCC 700669
Size (bp)81016
GC content [Genome] (%)34 [39]
Insertion sitethe 3' end of rplL (SPN23F_13190)
FunctionTetracycline and chloramphenicol resistance; Toxin-antitoxin system
Species that ICE can be transferred to-
Nucleotide SequenceFM211187 (complete ICE sequence in this genome)
Replicon chromosome (2221315 bp, Project:31233) [NC_011900]
Genome coordinates1207785..1288800
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESp23FST81 form FM211187
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SPN23F123401205229..1205366 [-], 138220674477 putative uncharacterized protein
2SPN23F123501205568..1206155 [-], 588220674478 putative membrane protein
3SPN23F123601206158..1206391 [-], 234pseudogene putative uncharacterized protein (pseudogene)
4SPN23F123701206404..1206784 [-], 381220674479 putative uncharacterized protein
5SPN23F123801206777..1207100 [-], 324220674480 putative uncharacterized protein
6SPN23F123901207108..1207362 [-], 255220674481 putative replication initiator protein
7SPN23F124001207362..1207532 [-], 171220674482 conserved hypothetical protein
8SPN23F124101207785..1208972 [-], 1188220674483  [UniProt] integrase
9SPN23F124201208944..1209213 [-], 270220674484  [UniProt] conserved hypothetical protein
10SPN23F124301209814..1211643 [-], 1830220674485  [UniProt] relaxase
11SPN23F124401211630..1211995 [-], 366220674486  [UniProt] putative mobilisation protein
12SPN23F124501212000..1212356 [-], 357220674487  [UniProt] putative mobilisation protein
13SPN23F124601212740..1212994 [-], 255220674488  [UniProt] putative uncharacterized protein
14SPN23F124701213060..1217064 [-], 4005220674489  [UniProt] putative DNA helicase II, UvrD
15SPN23F124801217186..1217572 [-], 387220674490  [UniProt] hypothetical protein
16SPN23F124901217644..1218594 [-], 951220674491  [UniProt] putative uncharacterized protein
17SPN23F125001218679..1219797 [-], 1119220674492  [UniProt] putative uncharacterized protein
18SPN23F125101220059..1221855 [-], 1797220674493  [UniProt] putative NTPase protein
19SPN23F125201222272..1222538 [-], 267220674494  [UniProt] hypothetical protein
20SPN23F125301222525..1223229 [-], 705220674495  [UniProt] putative phosphoserine phosphatase
21SPN23F125401223282..1223848 [-], 567220674496  [UniProt] hypothetical protein
22SPN23F125501223941..1224165 [-], 225220674497  [UniProt] hypothetical protein
23SPN23F125601224254..1224871 [-], 618220674498  [UniProt] hypothetical protein
24SPN23F125701225193..1225915 [-], 723220674499  [UniProt] putative uncharacterized protein
25rep1226244..1227167 [+], 924220674500  [UniProt] replication protein
26SPN23F125901228032..1228682 [-], 651220674501  [UniProt] putative chloramphenicol acetyltransferaseAR
27SPN23F126001228853..1229101 [-], 249220674502  [UniProt] putative uncharacterized protein
28SPN23F126101229340..1230128 [-], 789220674503  [UniProt] putative uncharacterized protein
29SPN23F126201230604..1231362 [-], 759220674504  [UniProt] zeta toxinTA
30SPN23F126301231362..1231838 [-], 477220674505  [UniProt] putative epsilon antitoxinTA
31SPN23F126401231908..1232180 [-], 273220674506  [UniProt] putative uncharacterized protein
32SPN23F126501232218..1232601 [-], 384220674507  [UniProt] putative uncharacterized protein
33SPN23F126601232598..1232831 [-], 234220674508  [UniProt] putative uncharacterized protein
34SPN23F126701232882..1233967 [-], 1086220674509  [UniProt] putative uncharacterized protein
35SPN23F126801233977..1234618 [-], 642220674510  [UniProt] putative uncharacterized protein
36SPN23F126901234839..1236962 [-], 2124220674511  [UniProt] putative lantibiotic transport/processing ATP-binding protein
37SPN23F127001236969..1240220 [-], 3252220674512  [UniProt] putative lantibiotic synthetase
38SPN23F127011240303..1240518 [-], 216220674513  [UniProt] putative lantibiotic precursor
39SPN23F127101240663..1241343 [-], 681220674514  [UniProt] putative lantibiotic ABC transporter
40SPN23F127201241392..1242132 [-], 741220674515  [UniProt] putative lantibiotic ABC transporter
41SPN23F127301242125..1243060 [-], 936220674516  [UniProt] putative lantibiotic ABC transporter, ATP-binding protein
42SPN23F127401243238..1243411 [-], 174220674517  [UniProt] putative membrane protein
43SPN23F127501243602..1244462 [+], 861220674518  [UniProt] transcriptional regulator
44SPN23F127601244545..1244835 [-], 291220674519  [UniProt] putative membrane protein
45SPN23F127701244849..1245133 [-], 285220674520  [UniProt] putative uncharacterized protein
46SPN23F127801245208..1253932 [-], 8725220674521  [UniProt] putative conjugative transposon DNA recombination protein
47SPN23F127901246260..1248071 [-], 1812220674522  [UniProt] putative group II intron reverse transcriptase/maturase
48SPN23F128201253980..1254390 [-], 411pseudogene putative uncharacterized protein (pseudogene)
49SPN23F128301254542..1255108 [-], 567220674523  [UniProt] putative uncharacterized protein
50SPN23F128401255346..1258159 [-], 2814220674524  [UniProt] putative conjugal transfer protein
51SPN23F128501258171..1260486 [-], 2316220674525  [UniProt] putative conjugal transfer protein
52SPN23F128601260476..1260838 [-], 363220674526  [UniProt] putative uncharacterized protein
53SPN23F128701260892..1261746 [-], 855220674527  [UniProt] putative uncharacterized protein
54SPN23F128801261763..1262005 [-], 243220674528  [UniProt] putative uncharacterized protein
55traG1262026..1263906 [-], 1881220674529  [UniProt] putative conjugal transfer protein TraG
56SPN23F129001263903..1264391 [-], 489220674530  [UniProt] putative uncharacterized protein
57SPN23F129101264381..1264680 [-], 300220674531  [UniProt] putative uncharacterized protein
58SPN23F129201264963..1265799 [-], 837220674532  [UniProt] conserved hypothetical protein
59SPN23F129301265799..1266389 [-], 591220674533  [UniProt] conserved hypothetical protein
60orf231266820..1267134 [+], 315220674534  [UniProt] conjugative transposon protein
61orf221267153..1267536 [+], 384220674535  [UniProt] conjugative transposon protein
62orf211267565..1268950 [+], 1386220674536  [UniProt] conjugative transposon FtsK/SpoIIIE-family protein
63orf201269128..1270333 [+], 1206220674537  [UniProt] putative conjugative transposon replication initiation factor
64orf191270376..1270597 [+], 222220674538  [UniProt] conjugative transposon protein
65orf181270714..1271211 [+], 498220674539  [UniProt] conjugative transposon protein
66orf171271462..1271692 [+], 231220674540  [UniProt] putative conjugative transposon membrane protein
67orf161271676..1274123 [+], 2448220674541  [UniProt] conjugative transposon ATP/GTP-binding protein
68orf151274126..1276276 [+], 2151220674542  [UniProt] conjugative transposon membrane protein
69orf141276295..1277296 [+], 1002220674543  [UniProt] putative cell wall hydrolaseVF
70orf131277311..1278225 [+], 915220674544  [UniProt] putative conjugative transposon exported protein
71tetM1278602..1280521 [+], 1920220674545  [UniProt] conjugative transposon tetracycline resistance proteinAR
72orf91280867..1281220 [-], 354220674546  [UniProt] putative conjugative transposon regulatory protein
73SPN23F130611281350..1281496 [+], 147220674547  [UniProt] putative uncharacterized protein
74orf71281725..1282147 [+], 423220674548  [UniProt] putative conjugative transposon regulatory protein
75xis1282835..1283038 [+], 204220674549  [UniProt] excisionase
76SPN23F130901283120..1284336 [+], 1217pseudogene putative integrase (pseudogene)
77SPN23F131101284551..1285138 [-], 588220674550  [UniProt] putative CAAX amino terminal protease
78SPN23F131201285141..1285374 [-], 234220674551  [UniProt] putative uncharacterized protein
79SPN23F131301285387..1285767 [-], 381220674552  [UniProt] putative uncharacterized protein
80SPN23F131401285760..1286209 [-], 450220674553  [UniProt] putative uncharacterized protein
81SPN23F131501286193..1287551 [-], 1359220674554  [UniProt] putative DNA methylase
82SPN23F131601287650..1288429 [-], 780220674555  [UniProt] putative replication initiator protein
83SPN23F131701288426..1288599 [-], 174220674556  [UniProt] putative uncharacterized protein
84rplL1288801..1289169 [-], 369220674557 50S ribosomal protein L7/L12
85rplJ1289245..1289745 [-], 501220674558 50S ribosomal protein L10
86SPN23F132101289995..1291254 [-], 1260220674559 probable amidohydrolase
87SPN23F132201291601..1293349 [-], 1749220674560 ABC transporter ATP-binding membrane protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins74Fasta
(1) Croucher NJ; Walker D; Romero P; Lennard N; Paterson GK; Bason NC; Mitchell AM; Quail MA; Andrew PW; Parkhill J; Bentley SD; Mitchell TJ (2009). Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol. 191(5):1480-9. [PudMed:19114491]