ICEberg
ICEberg ID240
NameICEMmc95010-1a
FamilyICEM
OrganismMycoplasma mycoides subsp. capri LC str. 95010
Size (bp)30052
GC content [Genome] (%)24 [23]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFQ377874 (complete ICE sequence in this genome)
Replicon[NC_015431]
Genome coordinates270699..300750
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICEMmc95010-1a form FQ377874
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1typA266221..268050 [-], 1830328801779 GTP binding protein TypA/BipA homolog
2MLC_2050268295..269071 [+], 777328801780 Conserved hypothetical protein, predicted lipoprotein, DUF285 family
3MLC_2060269117..269908 [+], 792328801781 Conserved hypothetical protein, predicted lipoprotein, DUF285 family
4MLC_2070270037..270465 [+], 429328801782 Conserved hypothetical protein, predicted lipoprotein, interrupted by an ICE
5MLC_2080270699..271487 [+], 789328801783  [UniProt] CDS1, conserved hypothetical protein (part of ICE)
6MLC_2090271756..273000 [+], 1245328801784  [UniProt] CDS3, putative relaxase (part of ICE)
7MLC_2100273036..273479 [+], 444328801785  [UniProt] Hypothetical protein (part of ICE)
8MLC_2110273942..274208 [+], 267328801786  [UniProt] Hypothetical protein (part of ICE)
9MLC_2120274307..274633 [+], 327328801787  [UniProt] Hypothetical protein (part of ICE)
10MLC_2130274645..276660 [+], 2016328801788  [UniProt] CDS5, predicted transmembrane protein with a TraG/VirD4 domain (part of ICE)
11MLC_2140276675..277394 [+], 720328801789  [UniProt] Conserved hypothetical protein, DUF285 family (part of ICE)
12MLC_2150277409..277825 [+], 417328801790  [UniProt] Single stranded DNA binding protein (part of ICE)
13MLC_2160277863..279053 [+], 1191328801791  [UniProt] CDSA, conserved hypothetical protein (part of ICE)
14MLC_2170279291..280817 [+], 1527328801792  [UniProt] Conserved hypothetical protein, predicted lipoprotein (part of ICE)
15MLC_2180281365..284100 [+], 2736328801793  [UniProt] Hypothetical protein, predicted transmembrane protein (part of ICE)
16MLC_2190284470..284850 [+], 381328801794  [UniProt] CDS15, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
17MLC_2200284854..286773 [+], 1920328801795  [UniProt] CDS16, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
18MLC_2210286798..289641 [+], 2844328801796  [UniProt] CDS17, TraE/VirB4 family NTPase (part of ICE)
19MLC_2220289654..290319 [+], 666328801797  [UniProt] CDS18, conserved hypothetical protein (part of ICE)
20MLC_2230290321..295324 [+], 5004328801798  [UniProt] CDS19, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
21MLC_2240295785..296723 [+], 939328801799  [UniProt] Hypothetical protein (part of ICE)
22MLC_2250297026..297649 [+], 624328801800  [UniProt] Conserved hypothetical protein (part of ICE)
23MLC_2260297965..298330 [+], 366328801801  [UniProt] Conserved hypothetical protein (part of ICE)
24MLC_2270298554..299468 [+], 915328801802  [UniProt] CDSG, Soj/ParA family protein (part of ICE)
25MLC_2280299518..300750 [+], 1233328801803  [UniProt] CDS22, conserved hypothetical protein (part of ICE)
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Thiaucourt F; Manso-Silvan L; Salah W; Barbe V; Vacherie B; Jacob D; Breton M; Dupuy V; Lomenech AM; Blanchard A; Sirand-Pugnet P (2011). Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective. BMC Genomics. 12:114. [PudMed:21324191]