ICEberg
ICEberg
ICEberg ID241
NameICEMmc95010-1b
FamilyICEM
OrganismMycoplasma mycoides subsp. capri LC str. 95010
Size (bp)29470
GC content [Genome] (%)24 [23]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFQ377874 (complete ICE sequence in this genome)
Replicon[NC_015431]
Genome coordinates381650..411119
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICEMmc95010-1b form FQ377874
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1MLC_2860377226..378059 [+], 834328801861 Transcription regulator gntR
2scrA378181..379878 [+], 1698328801862 Phosphotransferase system PTS, sucrose specific EIIBC component
3MLC_2880379881..380789 [+], 909328801863 Hypothetical protein, predicted glucokinase regulator
4MLC_2890381650..382882 [-], 1233328801864  [UniProt] CDS22, conserved hypothetical protein (part of ICE)
5MLC_2900382932..383846 [-], 915328801865  [UniProt] CDSG, Soj/ParA family protein (part of ICE)
6MLC_2910384070..384435 [-], 366328801866  [UniProt] Conserved hypothetical protein (part of ICE)
7MLC_2920384751..385374 [-], 624328801867  [UniProt] Conserved hypothetical protein (part of ICE)
8MLC_2930385677..386615 [-], 939328801868  [UniProt] Conserved hypothetical protein (part of ICE)
9MLC_2940387076..392079 [-], 5004328801869  [UniProt] CDS19, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
10MLC_2950392081..392614 [-], 534328801870  [UniProt] CDS18, conserved hypothetical protein (part of ICE)
11MLC_2960392760..395603 [-], 2844328801871  [UniProt] CDS17, TraE/VirB4 family NTPase (part of ICE)
12MLC_2970395628..397547 [-], 1920328801872  [UniProt] CDS16, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
13MLC_2980397551..397931 [-], 381328801873  [UniProt] CDS15, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
14MLC_2990398301..401036 [-], 2736328801874  [UniProt] Conserved hypothetical protein, predicted transmembrane protein (part of ICE)
15MLC_3000401584..403110 [-], 1527328801875  [UniProt] Conserved hypothetical protein, predicted lipoprotein (part of ICE)
16MLC_3010403348..404538 [-], 1191328801876  [UniProt] CDSA, conserved hypothetical protein (part of ICE)
17MLC_3020404576..404992 [-], 417328801877  [UniProt] Single stranded DNA binding protein (part of ICE)
18MLC_3030405007..405726 [-], 720328801878  [UniProt] Conserved hypothetical protein, DUF285 family (part of ICE)
19MLC_3040405741..407756 [-], 2016328801879  [UniProt] CDS5, predicted transmembrane protein with a TraG/VirD4 domain (part of ICE)
20MLC_3050407768..408193 [-], 426328801880  [UniProt] Hypothetical protein (part of ICE)
21MLC_3060408229..409473 [-], 1245328801881  [UniProt] CDS3, putative relaxase (part of ICE)
22MLC_3070409742..410530 [-], 789328801882  [UniProt] CDS1, conserved hypothetical protein (part of ICE)
23MLC_3080410721..411119 [-], 399328801883  [UniProt] Pseudogene of hypothetical protein (N terminal part)
24MLC_3090411332..414472 [+], 3141328801884 Hypothetical protein, predicted transmembrane protein
25MLC_3100414487..415101 [+], 615328801885 Conserved hypothetical protein, predicted lipoprotein
26MLC_3110415234..415623 [+], 390328801886 Hypothetical protein, predicted lipoprotein
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Thiaucourt F; Manso-Silvan L; Salah W; Barbe V; Vacherie B; Jacob D; Breton M; Dupuy V; Lomenech AM; Blanchard A; Sirand-Pugnet P (2011). Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective. BMC Genomics. 12:114. [PudMed:21324191]