ICEberg
ICEberg ID289
NameICELm1
FamilyTn916
OrganismListeria monocytogenes EGD-e
Size (bp)~21.3 k
GC content [Genome] (%)36 [37]
Insertion site3' End of a gene encoding a GMP synthase
FunctionPutative cadmium resistance
Species that ICE can be transferred to-
Nucleotide SequenceAL591824 (ICE sequence without defined boundaries in this genome)
Replicon chromosome (2944528 bp, Project:276) [NC_003210]
Genome coordinates1131501..1149734
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICELm1 form AL591824
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1lmo10921126704..1128194 [+], 149116410494 -
2lmo10931128206..1129030 [+], 82516410495 -
3lmo10941129043..1129351 [+], 30916410496 -
4lmo10951129412..1129816 [+], 40516410497 -
5guaA1129945..1131501 [+], 155716410498 -
6lmo10971131558..1132760 [-], 120316410499  [UniProt]  [KEGG]-VF
7lmo10981133466..1133696 [-], 23116410500  [UniProt]  [KEGG]-
8lmo10991133698..1134117 [-], 42016410501  [UniProt]  [KEGG]-
9cadA1134472..1136595 [-], 212416410502  [UniProt]  [KEGG]cadmium resistance protein
10lmo11011136900..1137400 [+], 50116410503  [UniProt]  [KEGG]-VF
11lmo11021137533..1137868 [-], 33616410504  [UniProt]  [KEGG]-
12lmo11031137997..1138914 [-], 91816410505  [UniProt]  [KEGG]-
13lmo11041138930..1139940 [-], 101116410506  [UniProt]  [KEGG]-VF
14lmo11051139940..1142099 [-], 216016410507  [UniProt]  [KEGG]-
15lmo11061142099..1144549 [-], 245116410508  [UniProt]  [KEGG]-
16lmo11071144533..1144928 [-], 39616410509  [UniProt]  [KEGG]-
17lmo11081145211..1145711 [-], 50116410510  [UniProt]  [KEGG]-
18lmo11091145723..1145944 [-], 22216410511  [UniProt]  [KEGG]-
19lmo11101145941..1146231 [-], 29116410512  [UniProt]  [KEGG]-
20lmo11111146228..1147412 [-], 118516410513  [UniProt]  [KEGG]-
21lmo11121147603..1149003 [-], 140116410514  [UniProt]  [KEGG]-
22lmo11131149011..1149385 [-], 37516410515  [UniProt]  [KEGG]-
23lmo11141149406..1149720 [-], 31516410516  [UniProt]  [KEGG]-
24lmo11151149887..1152475 [-], 258916410517 -
25lmo11161153010..1153783 [+], 77416410518 -
26lmo11171153848..1154204 [+], 35716410519 -
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins18Fasta
(1) Burrus V; Pavlovic G; Decaris B; Guedon G (2002). The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration. Plasmid. 48(2):77-97. [PudMed:12383726] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature