ICEberg
ICEberg ID305
NameICESauST398-1
FamilyTn916
OrganismStaphylococcus aureus subsp. aureus ST398
Size (bp)18032
GC content [Genome] (%)38.7 [33]
Insertion siteAT rich regions
Functiontetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceAM990992 (complete ICE sequence in this genome)
Replicon chromosome (2872582 bp, Project:29427) [AM990992]
Genome coordinates997771..1015802
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESauST398-1 form AM990992
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SAPIG0951996062..996964 [+], 903283470167 fumarylacetoacetate
2SAPIG0952997291..997680 [+], 390283470168 conserved hypothetical protein
3SAPIG0953997945..999162 [-], 1218283470169  [UniProt] transposase from transposon (Integrase)
4SAPIG0954999244..999447 [-], 204283470170  [UniProt] conserved domain protein
5SAPIG09551000135..1000557 [-], 423283470171  [UniProt] sigma-70, region 4 family
6SAPIG09561001062..1001415 [+], 354283470172  [UniProt] transcriptional regulator, putative
7SAPIG09571001761..1003680 [-], 1920283470173  [UniProt] TetM proteinAR
8SAPIG09581004057..1004989 [-], 933283470174  [UniProt] conjugative transposon protein
9SAPIG09591004986..1005987 [-], 1002283470175  [UniProt] NLP/P60 family proteinVF
10SAPIG09601005984..1008161 [-], 2178283470176  [UniProt] conjugative transposon membrane protein
11SAPIG09611008164..1010611 [-], 2448283470177  [UniProt] conjugative transposon protein
12SAPIG09621010595..1010987 [-], 393283470178  [UniProt] conjugative transposon membrane protein
13SAPIG09631011076..1011573 [-], 498283470179  [UniProt] conjugative transposon protein
14SAPIG09641011690..1011911 [-], 222283470180  [UniProt] conserved domain protein
15SAPIG09651011954..1013159 [-], 1206283470181  [UniProt] transcriptional regulator, Cro/CI family
16SAPIG09661013337..1014722 [-], 1386283470182  [UniProt] ftsk/spoiiie family protein
17SAPIG09671014751..1015137 [-], 387283470183  [UniProt] conjugative transposon protein
18SAPIG09681015153..1015305 [-], 153283470184  [UniProt] conjugative transposon protein
19SAPIG09691015836..1016147 [-], 312283470185 transposase
20cdr1017038..1018354 [-], 1317283470186 CoA-disulfide reductase
21SAPIG09711018406..1019230 [-], 825283470187 hydrolase
22SAPIG09721019344..1019652 [+], 309283470188 N-6 Adenine-specific DNA methylase YitW
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins16Fasta
(1) Schijffelen MJ; Boel CH; van Strijp JA; Fluit AC (2010). Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis. BMC Genomics. 11:376. [PudMed:20546576]