ICEberg
ICEberg ID307
NameTn916(RST11)
FamilyTn916
OrganismStaphylococcus rostri RST11
Size (bp)18032
GC content [Genome] (%)38.7
Insertion siteAT rich regions
Functiontetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFN550102 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..18032
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of Tn916(RST11) form FN550102
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-194..313 [+], 120258590731  [UniProt] hypothetical protein
2-336..650 [+], 315258590732  [UniProt] conjugative transposon protein
3-666..1052 [+], 387258590733  [UniProt] conjugative transposon protein
4-1081..2466 [+], 1386258590734  [UniProt] hypothetical protein
5-2860..3849 [+], 990258590735  [UniProt] putative transcriptional regulator
6-3892..4113 [+], 222258590736  [UniProt] conjugative transposon protein
7-4230..4727 [+], 498258590737  [UniProt] conjugative transposon protein
8-4702..5208 [+], 507258590738  [UniProt] conjugative transposon protein
9-5192..7639 [+], 2448258590739  [UniProt] putative regulatory protein
10-7642..9819 [+], 2178258590740  [UniProt] putative membrane protein
11-9816..10817 [+], 1002258590741  [UniProt] putative membrane proteinVF
12-10814..11746 [+], 933258590742  [UniProt] putative membrane protein
13-12021..12107 [+], 87258590743  [UniProt] tetM leader peptide
14tetM12108..14042 [+], 1935258590744  [UniProt] tetracycline resistance proteinAR
15-14140..14328 [+], 189258590745  [UniProt] putative transcriptional regulator
16-14388..14741 [+], 354pseudogene -
17-14946..15017 [+], 72258590746  [UniProt] putative ATP-binding protein
18-15195..15668 [+], 474258590747  [UniProt] putative regulatory protein
19-15665..15895 [+], 231258590748  [UniProt] putative ATP-binding protein
20-16121..16372 [-], 252258590749  [UniProt] excisionase
21Xis-Tn16356..16559 [+], 204258590750  [UniProt] excisionase
22Int-Tn16641..17858 [+], 1218258590751  [UniProt] transposase
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Stegmann R et al. (2010). Antibiotic resistance profile of Staphylococcus rostri, a new species isolated from healthy pigs. Vet Microbiol. 145(1-2). [PudMed:20399039] experimental
 
experimental experimental literature