ICEberg
ICEberg ID309
NameICESag2603VR-1
FamilyTn916
OrganismStreptococcus agalactiae 2603V/R
Size (bp)18031
GC content [Genome] (%)38.7 [35]
Insertion siteAT rich regions
Functiontetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceAE009948 (complete ICE sequence in this genome)
Replicon chromosome (2160267 bp, Project:330) [NC_004116]
Genome coordinates923465..941495
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESag2603VR-1 form AE009948
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SAG0912920281..921384 [+], 110422533934 conserved hypothetical protein
2cat921505..922143 [-], 63922533935 chloramphenicol acetyltransferase
3SAG0914922854..923465 [+], 61222533936 conserved hypothetical protein
4SAG0915923639..924856 [-], 121822533937  [UniProt]  [KEGG]Tn916, transposase
5SAG0916924938..925141 [-], 20422533938  [UniProt]  [KEGG]Tn916, excisionase
6SAG0917925125..925376 [+], 25222533939  [UniProt]  [KEGG]Tn916, hypothetical protein
7SAG0918925602..925832 [-], 23122533940  [UniProt]  [KEGG]Tn916, hypothetical protein
8SAG0919925829..926302 [-], 47422533941  [UniProt]  [KEGG]Tn916, hypothetical protein
9SAG0920926480..926551 [-], 7222533942  [UniProt]  [KEGG]Tn916, hypothetical protein
10SAG0921926756..927109 [+], 35422533943  [UniProt]  [KEGG]Tn916, transcriptional regulator, putative
11SAG0922927169..927354 [-], 18622533944  [UniProt]  [KEGG]Tn916, hypothetical protein
12tetM927455..929374 [-], 192022533945  [UniProt]  [KEGG]Tn916, tetracycline resistance proteinAR
13SAG0924929390..929476 [-], 8722533946  [UniProt]  [KEGG]Tn916, tetM leader peptide
14SAG0925929751..930683 [-], 93322533948  [UniProt]  [KEGG]Tn916, hypothetical protein
15SAG0926930680..931681 [-], 100222533949  [UniProt]  [KEGG]Tn916, NLP/P60 family proteinVF
16SAG0927931678..933855 [-], 217822533950  [UniProt]  [KEGG]membrane protein, putative
17SAG0929936288..936794 [-], 50722533951  [UniProt]  [KEGG]Tn916, hypothetical protein
18SAG0930936769..937266 [-], 49822533952  [UniProt]  [KEGG]Tn916, hypothetical protein
19SAG0931937383..937604 [-], 22222533953  [UniProt]  [KEGG]Tn916, hypothetical protein
20SAG0932937647..938852 [-], 120622533954  [UniProt]  [KEGG]Tn916, transcriptional regulator, putative
21SAG0933939030..940415 [-], 138622533955  [UniProt]  [KEGG]Tn916, FtsK/SpoIIIE family protein
22SAG0934940444..940830 [-], 38722533956  [UniProt]  [PDB]  [KEGG]Tn916, hypothetical protein
23SAG0935940846..941160 [-], 31522533957  [UniProt]  [KEGG]Tn916, hypothetical protein
24SAG0936941183..941302 [-], 12022533958  [UniProt]  [KEGG]Tn916, hypothetical protein
25SAG0938943034..943402 [-], 36922533959 transcriptional regulator, GntR family
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Tettelin H; Masignani V; Cieslewicz MJ; Eisen JA; Peterson S; Wessels MR; Paulsen IT; Nelson KE; Margarit I; Read TD; Madoff LC; Wolf AM; Beanan MJ; Brinkac LM; Daugherty SC; DeBoy RT; Durkin AS; Kolonay JF; Madupu R; Lewis MR; Radune D; Fedorova NB; Scanlan D; Khouri H; Mulligan S; Carty HA; Cline RT; Van Aken SE; Gill J; Scarselli M; Mora M; Iacobini ET; Brettoni C; Galli G; Mariani M; Vegni F; Maione D; Rinaudo D; Rappuoli R; Telford JL; Kasper DL; Grandi G; Fraser CM (2002). Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Proc Natl Acad Sci U S A. 99(19):12391-6. [PudMed:12200547]