ICEberg
ICEberg
ICEberg ID312
NameICECloUPII95-1
FamilyTn916
OrganismClostridiales genomosp. BVAB3 str. UPII9-5
Size (bp)18032
GC content [Genome] (%)38.8 [44]
Insertion siteAT rich regions
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP001850 (complete ICE sequence in this genome)
Replicon chromosome (1810248 bp, Project:46219) [NC_013895]
Genome coordinates538276..556307
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICECloUPII95-1 form CP001850
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1HMPREF0868_1220534550..535209 [+], 660289184459 single-strand binding family protein
2HMPREF0868_1219535352..535558 [+], 207289184197 DNA-binding helix-turn-helix protein
3HMPREF0868_1218535649..536674 [+], 1026289184639 conserved hypothetical protein
4HMPREF0868_1217536674..537564 [+], 891307346936 conserved hypothetical protein
5HMPREF0868_1216537568..538287 [+], 720307346937 conserved domain protein
6HMPREF0868_1215538611..538925 [+], 315289184625  [UniProt]  [KEGG]conserved hypothetical protein
7HMPREF0868_1214538941..539327 [+], 387289184889  [UniProt]  [KEGG]conserved hypothetical protein
8HMPREF0868_1213539356..540741 [+], 1386289184052  [UniProt]  [KEGG]FtsK/SpoIIIE family protein
9HMPREF0868_1212540919..542124 [+], 1206289185070  [UniProt]  [KEGG]DNA-binding helix-turn-helix protein
10HMPREF0868_1211542167..542388 [+], 222289184966  [UniProt]  [KEGG]conserved hypothetical protein
11ardA542505..542999 [+], 495289184944  [UniProt]  [KEGG]antirestriction protein
12HMPREF0868_1209542974..543480 [+], 507289184142  [UniProt]  [KEGG]conserved hypothetical protein
13HMPREF0868_1208543464..544579 [+], 1116307346938  [UniProt]  [KEGG]conserved domain protein
14HMPREF0868_1207544576..545910 [+], 1335307346939  [UniProt]  [KEGG]ATP/GTP-binding family protein
15HMPREF0868_1206545913..548090 [+], 2178289184678  [UniProt]  [KEGG]conserved hypothetical protein
16HMPREF0868_1205548087..549088 [+], 1002289185154  [UniProt]  [KEGG]NlpC/P60 family proteinVF
17HMPREF0868_1204549103..550020 [+], 918289184462  [UniProt]  [KEGG]conserved hypothetical protein
18HMPREF0868_1203550265..550381 [+], 117289184202  [UniProt]  [KEGG]tetracycline resistance determinant leader peptide
19HMPREF0868_1202550397..552316 [+], 1920289184191  [UniProt]  [KEGG]putative translation elongation factor GAR
20HMPREF0868_1201552662..553015 [-], 354289184929  [UniProt]  [KEGG]DNA-binding helix-turn-helix protein
21HMPREF0868_1200553520..553942 [+], 423289185348  [UniProt]  [KEGG]sigma-70, region 4
22HMPREF0868_1199554233..554361 [-], 129289184480  [UniProt]  [KEGG]conserved hypothetical protein
23HMPREF0868_1198554630..554833 [+], 204289183946  [UniProt]  [KEGG]DNA binding domain protein, excisionase family
24HMPREF0868_1197555243..556133 [+], 891307346940  [UniProt]  [KEGG]site-specific recombinase, phage integrase family
25HMPREF0868_1196556418..557749 [-], 1332289184163 relaxase/mobilization nuclease domain protein
26HMPREF0868_1195557752..558108 [-], 357289184828 conserved hypothetical protein
27HMPREF0868_1194558382..559590 [+], 1209289184953 transcriptional regulator, AraC family
28HMPREF0868_1193559636..560616 [-], 981289183925 transcriptional regulator, AraC family
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins19Fasta
Identified as part of this study from CP001850