ICEberg
ICEberg ID313
NameICESsu98HAH33-1
FamilyTn916
OrganismStreptococcus suis 98HAH33
Size (bp)18031
GC content [Genome] (%)38.8 [41]
Insertion siteAT rich regions
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP000408 (complete ICE sequence in this genome)
Replicon chromosome (2095698 bp, Project:17155) [NC_009443]
Genome coordinates887958..905988
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESsu98HAH33-1 form CP000408
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SSU98_0919884167..886032 [-], 1866145691572 Chromosome segregation ATPase
2SSU98_0920886019..886384 [-], 366145691573 unknown protein
3SSU98_0921886384..886959 [-], 576145691574 hypothetical protein
4SSU98_0922887114..888010 [+], 897145691575 putative Abi-alpha protein
5SSU98_0923888132..889349 [-], 1218145691576  [UniProt]  [KEGG]Tn916, transposase
6SSU98_0924889431..889634 [-], 204145691577  [UniProt]  [KEGG]hypothetical protein
7SSU98_0925890322..890753 [-], 432145691578  [UniProt]  [KEGG]hypothetical protein
8SSU98_0926891248..891601 [+], 354145691579  [UniProt]  [KEGG]Tn916, transcriptional regulator, putative
9SSU98_0928891947..893881 [-], 1935145691581  [UniProt]  [KEGG]Translation elongation factor (GTPases)AR
10SSU98_0927892774..892926 [+], 153145691580  [UniProt]  [KEGG]hypothetical protein
11SSU98_0929894243..895175 [-], 933145691582  [UniProt]  [KEGG]Tn916, hypothetical protein
12SSU98_0930895172..896173 [-], 1002145691583  [UniProt]  [KEGG]hypothetical proteinVF
13SSU98_0931896170..898347 [-], 2178145691584  [UniProt]  [KEGG]membrane protein, putative
14SSU98_0932898350..900806 [-], 2457145691585  [UniProt]  [KEGG]hypothetical protein
15SSU98_0933900781..901218 [-], 438145691586  [UniProt]  [KEGG]hypothetical protein
16SSU98_0934901261..901758 [-], 498145691587  [UniProt]  [KEGG]hypothetical protein
17SSU98_0935901786..902097 [-], 312145691588  [UniProt]  [KEGG]hypothetical protein
18SSU98_0936902140..903345 [-], 1206145691589  [UniProt]  [KEGG]Tn916, transcriptional regulator, putative
19SSU98_0937903523..904908 [-], 1386145691590  [UniProt]  [KEGG]hypothetical protein
20SSU98_0938904937..905323 [-], 387145691591  [UniProt]  [KEGG]hypothetical protein
21SSU98_0939905339..905653 [-], 315145691592  [UniProt]  [KEGG]hypothetical protein
22SSU98_0940906409..908241 [-], 1833145691593 DNA helicase
23SSU98_0941908213..908560 [-], 348145691594 hypothetical protein
24SSU98_0942908629..910299 [-], 1671145691595 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins17Fasta
(1) Palmieri C; Varaldo PE; Facinelli B (2011). Streptococcus suis, an Emerging Drug-Resistant Animal and Human Pathogen. Front Microbiol. 0.246527778. [PudMed:22275909]
(2) Chen C; Tang J; Dong W; Wang C; Feng Y; Wang J; Zheng F; Pan X; Liu D; Li M; Song Y; Zhu X; Sun H; Feng T; Guo Z; Ju A; Ge J; Dong Y; Sun W; Jiang Y; Wang J; Yan J; Yang H; Wang X; Gao GF; Yang R; Wang J; Yu J (2007). A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates. PLoS One. 2(3):e315. [PudMed:17375201]