ICEberg
ICEberg ID321
NameTn6003
FamilyTn916
OrganismStreptococcus pneumoniae Ar4
Size (bp)25101
GC content [Genome] (%)38
Insertion siteAT rich regions
FunctionErythromycin, aminoglycoside, streptothricin and tetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceAM410044 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..25101
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of Tn6003 form AM410044
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-194..283 [+], 90160960256  [UniProt] truncated hypothetical protein
2-336..650 [+], 315160960257  [UniProt] hypothetical protein
3-666..1052 [+], 387160960258  [UniProt] hypothetical protein
4-1081..2466 [+], 1386160960259  [UniProt] hypothetical protein
5-2860..4062 [+], 1203133919246  [UniProt] hypothetical protein
6-3895..4062 [+], 168148880080  [UniProt] MLS leader peptide
7ORFM04111..4194 [+], 84133919247  [UniProt] MLS leader peptide
8ermB4319..5104 [+], 786pseudogene -
9aadE5107..5445 [+], 339160960260  [UniProt] adenyltransferase
10sat45454..5984 [+], 531160960261  [UniProt] streptothricin acetyltransferase
11aphA-36077..6871 [+], 795133919249  [UniProt] aminoglycoside phosphotransferase type IIIAR
12-7147..7719 [+], 573133919250  [UniProt] hypothetical protein
13-8336..8419 [+], 84133919251  [UniProt] MLS leader peptide
14ermB8544..9281 [+], 738133919252  [UniProt] MLS methylaseAR
15-9226..9417 [+], 192133919253  [UniProt] hypothetical protein
16-9538..10785 [-], 1248133919254  [UniProt] putative transposase
17-10965..11186 [+], 222133919255  [UniProt] hypothetical protein
18-11303..11800 [+], 498160960262  [UniProt] hypothetical protein
19-11775..12281 [+], 507160960263  [UniProt] hypothetical protein
20-12265..14712 [+], 2448160960264  [UniProt] hypothetical protein
21-14715..16892 [+], 2178160960265  [UniProt] hypothetical protein
22-16889..17674 [+], 786160960266  [UniProt] hypothetical proteinVF
23-17887..18819 [+], 933160960267  [UniProt] hypothetical protein
24-19094..19180 [+], 87160960268  [UniProt] tet(M) leader peptide
25tet(M)19181..21113 [+], 1933pseudogene -
26-21211..21399 [+], 189160960269  [UniProt] hypothetical protein
27-21459..21812 [-], 354160960270  [UniProt] hypothetical protein
28-22017..22088 [+], 72160960271  [UniProt] hypothetical protein
29-22266..22739 [+], 474160960272  [UniProt] hypothetical protein
30-22736..22966 [+], 231160960273  [UniProt] hypothetical protein
31-23187..23441 [-], 255160960274  [UniProt] hypothetical protein
32Xis-Tn23425..23628 [+], 204160960275  [UniProt] excisionase
33Int-Tn23710..24927 [+], 1218160960276  [UniProt] integrase
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins31Fasta
(1) Cochetti I; Tili E; Vecchi M; Manzin A; Mingoia M; Varaldo PE; Montanari MP (2007). New Tn916-related elements causing erm(B)-mediated erythromycin resistance in tetracycline-susceptible pneumococci. J Antimicrob Chemother. 60(1):127-31. [PudMed:17483548] experimental
 
experimental experimental literature