ICEberg
ICEberg ID324
NameICESpnTCH8341-1
FamilyTn916
OrganismStreptococcus pneumoniae TCH8431/19A
Size (bp)26390
GC content [Genome] (%)37.9 [39]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP001993 (complete ICE sequence in this genome)
Replicon chromosome (2088772 bp, Project:49735) [NC_014251]
Genome coordinates2004999..2031388
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESpnTCH8341-1 form CP001993
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1HMPREF0837_121852000721..2001737 [-], 1017298239282 LytR family transcriptional regulator
2HMPREF0837_121862001745..2002263 [-], 519298239283 GNAT family acetyltransferase
3HMPREF0837_121872002253..2002696 [-], 444298239284 ATP-binding protein
4HMPREF0837_121882002782..2003402 [-], 621298239285 lipoprotein
5HMPREF0837_121892003708..2004571 [-], 864298239286 transcriptional activator
6HMPREF0837_121902004762..2004932 [+], 171298239287 conserved hypothetical protein
7HMPREF0837_121912005334..2005648 [+], 315298239288  [UniProt]  [KEGG]conjugative transposon protein
8HMPREF0837_121922005664..2006050 [+], 387298239289  [UniProt]  [KEGG]conjugative transposon protein
9HMPREF0837_121932006079..2007464 [+], 1386298239290  [UniProt]  [KEGG]FtsK/SpoIIIE family cell division protein
10HMPREF0837_121942007467..2007619 [+], 153298239291  [UniProt]  [KEGG]conserved hypothetical protein
11HMPREF0837_121952007642..2008904 [+], 1263298239292  [UniProt]  [KEGG]replication initiation protein
12HMPREF0837_121962008894..2009061 [+], 168298239293  [UniProt]  [KEGG]conserved hypothetical protein
13ermBP2009318..2010055 [+], 738298239294  [UniProt]  [KEGG]rRNA (adenine-N(6)-)-methyltransferaseAR
14HMPREF0837_121982010060..2010191 [+], 132298239295  [UniProt]  [KEGG]conserved hypothetical protein
15HMPREF0837_121992010312..2011559 [-], 1248298239296  [UniProt]  [KEGG]transposase
16HMPREF0837_122002011739..2011960 [+], 222298239297  [UniProt]  [KEGG]conserved hypothetical protein
17ardA2012077..2012574 [+], 498298239298  [UniProt]  [KEGG]antirestriction protein ArdA
18HMPREF0837_122022012549..2013055 [+], 507298239299  [UniProt]  [KEGG]conjugative transposon membrane protein
19HMPREF0837_122032013039..2015486 [+], 2448298239300  [UniProt]  [KEGG]conjugative transposon protein
20HMPREF0837_122042015489..2017666 [+], 2178298239301  [UniProt]  [KEGG]conjugative transposon membrane protein
21HMPREF0837_122052017663..2018664 [+], 1002298239302  [UniProt]  [KEGG]conserved NLP/P60 family proteinVF
22HMPREF0837_122062018661..2019593 [+], 933298239303  [UniProt]  [KEGG]conjugative transposon protein
23HMPREF0837_122072019955..2021889 [+], 1935298239304  [UniProt]  [KEGG]tetracycline resistance protein Tet (M)AR
24HMPREF0837_122082022068..2022256 [+], 189298239305  [UniProt]  [KEGG]conserved hypothetical protein
25umuC2022253..2022498 [+], 246298239306  [UniProt]  [KEGG]SOS responce UmuC protein
26HMPREF0837_122102022495..2022830 [+], 336298239307  [UniProt]  [KEGG]conserved hypothetical protein
27HMPREF0837_122112022843..2023211 [+], 369298239308  [UniProt]  [KEGG]conserved hypothetical protein
28HMPREF0837_122122023198..2023497 [+], 300298239309  [UniProt]  [KEGG]conserved hypothetical protein
29HMPREF0837_122132023615..2025078 [-], 1464298239310  [UniProt]  [KEGG]ABC superfamily ATP binding cassette transporter, ABC protein
30mreA2025198..2026415 [-], 1218298239311  [UniProt]  [KEGG]macrolide-efflux proteinAR
31HMPREF0837_122152026801..2026986 [-], 186298239312  [UniProt]  [KEGG]conserved hypothetical protein
32HMPREF0837_122162027493..2027684 [+], 192298239313  [UniProt]  [KEGG]conserved hypothetical protein
33HMPREF0837_122172027744..2028097 [-], 354298239314  [UniProt]  [KEGG]Tn916 transcriptional regulator
34HMPREF0837_122182028227..2028373 [+], 147298239315  [UniProt]  [KEGG]conserved hypothetical protein
35HMPREF0837_122192028602..2029024 [+], 423298239316  [UniProt]  [KEGG]conjugative transposon regulatory protein
36HMPREF0837_122202029021..2029251 [+], 231298239317  [UniProt]  [KEGG]conjugative transposon protein
37xis2029712..2029915 [+], 204298239318  [UniProt]  [KEGG]Tn916 excisionase (Xis) protein
38HMPREF0837_122222029997..2031214 [+], 1218298239319  [UniProt]  [KEGG]phage integrase family site-specific recombinase
39HMPREF0837_122232031564..2031704 [+], 141298239320 hypothetical protein
40HMPREF0837_122242031882..2031989 [+], 108298239321 conserved hypothetical protein
41HMPREF0837_122252032105..2034120 [+], 2016298239322 bacteriocin-associated integral membrane protein
42HMPREF0837_122262034122..2034754 [+], 633298239323 ABC superfamily ATP binding cassette transporter, ABC protein
43cinA22034895..2035056 [+], 162298239324 competence damage-inducible protein A
44ndk2035682..2036095 [-], 414298239325 nucleoside diphosphate kinase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins32Fasta
Identified as part of this study from CP001993