ICEberg
ICEberg ID327
NameICEFal35896-1
FamilyTn916
OrganismFilifactor alocis ATCC 35896
Size (bp)17986
GC content [Genome] (%)39.1 [35]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP002390 (complete ICE sequence in this genome)
Replicon[CP002390]
Genome coordinates1247077..1265062
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEFal35896-1 form CP002390
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1HMPREF0389_006261243539..1245209 [-], 1671291166661 site-specific recombinase
2HMPREF0389_006271245352..1245582 [-], 231320120498 hypothetical protein
3HMPREF0389_006281246047..1246457 [-], 411291166663 hypothetical protein
4HMPREF0389_006291246665..1247087 [-], 423291166664 ABC transporter, ATP-binding protein
5HMPREF0389_006301247251..1248468 [-], 1218291166665  [UniProt] transposase
6HMPREF0389_006311248550..1248753 [-], 204291166666  [UniProt] hypothetical protein
7HMPREF0389_006321249215..1249445 [-], 231291166667  [UniProt] hypothetical protein
8HMPREF0389_006331249442..1249867 [-], 426291166668  [UniProt] sigma-70, region 4 superfamily
9HMPREF0389_006341250378..1250731 [+], 354291166669  [UniProt] transcriptional regulator
10HMPREF0389_006351251073..1252992 [-], 1920291166670  [UniProt] tetracycline resistance proteinAR
11HMPREF0389_006361253369..1254283 [-], 915320120499  [UniProt] hypothetical protein
12HMPREF0389_006371254298..1255299 [-], 1002291166672  [UniProt] NLP/P60 family proteinVF
13HMPREF0389_006381255296..1257473 [-], 2178291166673  [UniProt] membrane protein
14HMPREF0389_006391257476..1259923 [-], 2448320120500  [UniProt] ATP/GTP-binding protein
15HMPREF0389_006401259907..1260338 [-], 432291166675  [UniProt] hypothetical protein
16HMPREF0389_006411260313..1260810 [-], 498291166676  [UniProt] antirestriction protein (ArdA)
17HMPREF0389_006421260927..1261148 [-], 222291166677  [UniProt] hypothetical protein
18HMPREF0389_006431261191..1262366 [-], 1176291166678  [UniProt] transcriptional regulator
19HMPREF0389_006441262572..1263966 [-], 1395291166679  [UniProt] FtsK/SpoIIIE family protein
20HMPREF0389_006451264006..1264389 [-], 384320120501  [UniProt] hypothetical protein
21HMPREF0389_006461264408..1264722 [-], 315291166681  [UniProt] hypothetical protein
22HMPREF0389_006471265051..1266049 [-], 999320120502 ABC transporter, ATP-binding protein
23HMPREF0389_006481266046..1266774 [-], 729291166683 hypothetical protein
24HMPREF0389_006491266774..1267364 [-], 591291166684 membrane protein
25HMPREF0389_006501267390..1269114 [-], 1725291166685 ABC transporter, permease/ATP-binding protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins17Fasta
Identified as part of this study from CP002390