ICEberg
ICEberg ID330
NameTn3872
FamilyTn916
OrganismStreptococcus pyogenes C-105
Size (bp)-
GC content [Genome] (%)-
Insertion siteAT rich regions
FunctionErythromycin and tetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceAM411624 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of Tn3872 from AM411624
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-318..404 [+], 87134269482  [UniProt] tet(M) leader peptide
2tet(M)420..2339 [+], 1920134269483  [UniProt] tetracycline resistance proteinAR
3-2437..2625 [+], 189134269484  [UniProt] hypothetical protein
4-2685..2821 [-], 137pseudogene -
5-3234..3317 [+], 84134269485  [UniProt] rRNA methylase leader peptide
6erm(B)3442..4179 [+], 738134269486  [UniProt] rRNA methylaseAR
 
AR: Blastp hit against the antibiotic resistance gene database ARDB.

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins5Fasta
(1) Brenciani A; Bacciaglia A; Vecchi M; Vitali LA; Varaldo PE; Giovanetti E (2007). Genetic elements carrying erm(B) in Streptococcus pyogenes and association with tet(M) tetracycline resistance gene. Antimicrob Agents Chemother. 51(4):1209-16. [PudMed:17261630] experimental
(2) McDougal LK; Tenover FC; Lee LN; Rasheed JK; Patterson JE; Jorgensen JH; LeBlanc DJ (1998). Detection of Tn917-like sequences within a Tn916-like conjugative transposon (Tn3872) in erythromycin-resistant isolates of Streptococcus pneumoniae. Antimicrob Agents Chemother. 42(9):2312-8. [PudMed:9736555] experimental
 
experimental experimental literature