ICEberg
ICEberg ID331
NameICESpnH19A6-1
FamilyTn916
OrganismStreptococcus pneumoniae Hungary19A-6
Size (bp)20884
GC content [Genome] (%)38.2 [39]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP000936 (complete ICE sequence in this genome)
Replicon chromosome (2245615 bp, Project:28035) [NC_010380]
Genome coordinates1302035..1322918
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESpnH19A6-1 form CP000936
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SPH_13971297490..1297807 [+], 318168995450 BlpT protein, fusion
2SPH_13981298046..1299605 [+], 1560168996189 ABC transporter, ATP-binding protein
3SPH_13991299754..1300653 [-], 900168996683 putative Probable protease HtpX homolog
4SPH_14001300655..1301215 [-], 561168996159 cytoplasmic membrane protein
5gidB1301309..1302022 [+], 714168996641 methyltransferase GidB
6SPH_14021302209..1303426 [-], 1218168995355  [UniProt]  [KEGG]transposase from transposon (Integrase)
7SPH_14031303508..1303711 [-], 204168996807  [UniProt]  [KEGG]conserved domain protein
8SPH_14041303695..1303946 [+], 252168995146  [UniProt]  [KEGG]conserved hypothetical protein
9SPH_14051304172..1304402 [-], 231168995796  [UniProt]  [KEGG]conserved hypothetical protein
10SPH_14061304399..1304821 [-], 423168995029  [UniProt]  [KEGG]sigma-70, region 4 family
11SPH_14071305050..1305196 [-], 147168996102  [UniProt]  [KEGG]conserved hypothetical protein
12SPH_14081305326..1305679 [+], 354168996612  [UniProt]  [KEGG]transcriptional regulator, putative
13SPH_14091306025..1307944 [-], 1920168996993  [UniProt]  [KEGG]tetracycline resistance proteinAR
14SPH_14101307960..1308076 [-], 117168996709  [UniProt]  [KEGG]Tetracycline resistance determinant leader peptide
15SPH_14111308321..1309238 [-], 918168996391  [UniProt]  [KEGG]conjugative transposon protein
16SPH_14121309253..1310254 [-], 1002168995752  [UniProt]  [KEGG]NLP/P60 family proteinVF
17SPH_14131310251..1312428 [-], 2178168995175  [UniProt]  [KEGG]conjugative transposon membrane protein
18SPH_14141312431..1314878 [-], 2448168996736  [UniProt]  [KEGG]conjugative transposon protein
19SPH_14151314862..1315368 [-], 507168996150  [UniProt]  [KEGG]conjugative transposon membrane protein
20SPH_14161315343..1315840 [-], 498168996725  [UniProt]  [KEGG]conjugative transposon protein
21SPH_14171315957..1316178 [-], 222168995536  [UniProt]  [KEGG]conserved domain protein
22SPH_14181316358..1317605 [+], 1248168996969  [UniProt]  [KEGG]transposase
23SPH_14191317726..1317917 [-], 192168995517  [UniProt]  [KEGG]conserved hypothetical protein
24SPH_14201317862..1318599 [-], 738168996373  [UniProt]  [KEGG]rRNA adenine N-6-methyltransferase (Macrolide-lincosamide-streptogramin B resistance protein)AR
25SPH_14221319046..1320275 [-], 1230168996489  [UniProt]  [KEGG]transcriptional regulator, Cro/CI family
26SPH_14231320453..1321838 [-], 1386168995744  [UniProt]  [KEGG]ftsk/spoiiie family protein
27SPH_14241321867..1322250 [-], 384168995240  [UniProt]  [KEGG]conjugative transposon protein
28SPH_14251322269..1322583 [-], 315168996522  [UniProt]  [KEGG]conjugative transposon protein
29SPH_14261322606..1322725 [-], 120168996162  [UniProt]  [KEGG]conserved hypothetical protein
30uraA1323215..1324498 [+], 1284168996214 uracil permease
31ffh1324594..1326165 [-], 1572168995284 signal recognition particle protein
32SPH_14291326177..1326509 [-], 333168997033 putative helix-turn-helix protein
33SPH_14301326600..1326977 [-], 378168995044 conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
Identified as part of this study from CP000936