ICEberg
ICEberg ID332
NameICE(Tn4371)6069
FamilyTn4371
OrganismPseudomonas aeruginosa UCBPP-PA14
Size (bp)43172
GC content [Genome] (%)65.55 [66]
Insertion site-
Functionczc metal resistance pumps
Species that ICE can be transferred to-
Nucleotide SequenceCP000438 (ICE sequence without defined boundaries in this genome)
Replicon chromosome (6537648 bp, Project:386) [NC_008463]
Genome coordinates2678435..2721213
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICE(Tn4371)6069 form CP000438
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1PA14_308302674712..2676055 [-], 1344115585779 putative two-component response regulator
2PA14_308402676132..2677544 [+], 1413115585778 putative signal transduction histidine kinase
3trbI2678435..2679706 [-], 1272115585777  [UniProt]  [KEGG]TrbI-like protein
4trbG2679709..2680698 [-], 990115585776  [UniProt]  [KEGG]TrbG-like protein
5trbF2680695..2681399 [-], 705115585775  [UniProt]  [KEGG]TrbF-like protein
6trbL2681412..2682782 [-], 1371115585774  [UniProt]  [KEGG]TrbG-like protein
7PA14_308902682980..2683123 [+], 144115585773  [UniProt]  [KEGG]hypothetical protein
8trbJ2683111..2683836 [-], 726115585772  [UniProt]  [KEGG]TrbJ-like protein
9trbE2683833..2686286 [-], 2454115585771  [UniProt]  [KEGG]TrbE-like protein
10trbC2686568..2686960 [-], 393115585770  [UniProt]  [KEGG]TrbC-like protein
11trbB2686957..2688027 [-], 1071115585769  [UniProt]  [KEGG]putative conjugal transfer protein
12PA14_309502688024..2688488 [-], 465115585768  [UniProt]  [KEGG]conserved hypothetical protein
13traG2688485..2690485 [-], 2001115585767  [UniProt]  [KEGG]TraG-like protein
14bphR2691005..2692000 [-], 996115585766  [UniProt]  [KEGG]putative transcriptional regulator
15PA14_309802692127..2692432 [-], 306115585765  [UniProt]  [KEGG]hypothetical protein
16PA14_309902692483..2693151 [-], 669115585764  [UniProt]  [KEGG]hypothetical protein
17PA14_310002693164..2693907 [-], 744115585763  [UniProt]  [KEGG]hypothetical protein
18PA14_310102693904..2697041 [-], 3138115585762  [UniProt]  [KEGG]putative cation efflux system protein
19PA14_310302697052..2698281 [-], 1230115585761  [UniProt]  [KEGG]putative cation efflux system protein
20PA14_310402698278..2699525 [-], 1248115585760  [UniProt]  [KEGG]putative cation efflux system protein
21PA14_310502699666..2700664 [-], 999115585759  [UniProt]  [KEGG]hypothetical protein
22PA14_310602700661..2701278 [-], 618115585758  [UniProt]  [KEGG]hypothetical protein
23PA14_310702701170..2703530 [-], 2361115585757  [UniProt]  [KEGG]conserved hypothetical protein
24PA14_310802703604..2704179 [-], 576115585756  [UniProt]  [KEGG]putative conjugal transfer protein
25PA14_310902704176..2705093 [-], 918115585755  [UniProt]  [KEGG]conserved hypothetical protein
26PA14_311002705011..2705649 [-], 639115585754  [UniProt]  [KEGG]putative plasmid partitioning protein
27PA14_311102705903..2707231 [-], 1329115585753  [UniProt]  [KEGG]putative replication initiator and transcriptional repressor protein
28PA14_311302707180..2707950 [-], 771115585752  [UniProt]  [KEGG]conserved hypothetical protein
29PA14_311502708294..2708695 [-], 402115585751  [UniProt]  [KEGG]hypothetical protein
30PA14_311602708860..2709183 [+], 324115585750  [UniProt]  [KEGG]hypothetical protein
31PA14_311702709230..2709337 [+], 108115585749  [UniProt]  [KEGG]hypothetical protein
32PA14_311802709577..2710638 [-], 1062115585748  [UniProt]  [KEGG]hypothetical protein
33PA14_311902710945..2712999 [-], 2055115585747  [UniProt]  [KEGG]conserved hypothetical protein
34PA14_312002713081..2713905 [-], 825115585746  [UniProt]  [KEGG]conserved hypothetical proteinVF
35PA14_312202714625..2714903 [-], 279115585745  [UniProt]  [KEGG]hypothetical protein
36PA14_312302714969..2715496 [-], 528115585744  [UniProt]  [KEGG]hypothetical protein
37PA14_312402715633..2716943 [-], 1311115585743  [UniProt]  [KEGG]putative nrbE-like protein
38PA14_312502717346..2717738 [-], 393115585742  [UniProt]  [KEGG]hypothetical protein
39PA14_312602718015..2718521 [-], 507115585741  [UniProt]  [KEGG]RadC-like proteinVF
40PA14_312702718848..2720011 [-], 1164115585740  [UniProt]  [KEGG]conserved hypothetical protein
41PA14_312802720008..2721213 [-], 1206115585739  [UniProt]  [KEGG]putative integrase
42pa1L2721861..2722229 [+], 369115585738 PA-I galactophilic lectin
43PA14_313002722503..2722844 [+], 342115585737 hypothetical protein
44PA14_313102722963..2723370 [+], 408115585736 hypothetical protein
45PA14_313302723429..2724928 [-], 1500115585735 putative EAL domain
46PA14_313402725301..2725657 [+], 357115585734 hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins39Fasta
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 9:242. [PudMed:19941653] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature