ICEberg
ICEberg ID334
NameICEAdeK601-1
FamilyTn4371
OrganismAlicycliphilus denitrificans K601
Size (bp)~52 K
GC content [Genome] (%)65 [67]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002657 (ICE sequence without defined boundaries in this genome)
Replicon[NC_015422]
Genome coordinates1657600..1709335
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEAdeK601-1 form CP002657
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Alide2_15561653251..1654213 [-], 963329309535 transposase IS4 family protein
2Alide2_15571654411..1655379 [-], 969329309536 transposase IS4 family protein
3Alide2_15591655594..1655929 [+], 336329309537 hypothetical protein
4Alide2_15601655898..1656842 [-], 945329309538 Integrase catalytic region
5Alide2_15621657385..1657603 [-], 219329309539 Protein of unknown function DUF2274
6Alide2_15631657600..1658886 [-], 1287329309540  [UniProt] conjugation TrbI family protein
7Alide2_15641658889..1659872 [-], 984329309541  [UniProt] P-type conjugative transfer protein TrbG
8Alide2_15651659869..1660573 [-], 705329309542  [UniProt] conjugal transfer protein TrbF
9Alide2_15661660586..1661971 [-], 1386329309543  [UniProt] P-type conjugative transfer protein TrbL
10Alide2_15671661968..1662288 [-], 321329309544  [UniProt] putative lipoprotein
11Alide2_15681662301..1663026 [-], 726329309545  [UniProt] P-type conjugative transfer protein TrbJ
12Alide2_15691663023..1665476 [-], 2454329309546  [UniProt] CagE, TrbE, VirB component of type IV transporter system, conserved region
13Alide2_15701665492..1665764 [-], 273329309547  [UniProt] conjugal transfer protein
14Alide2_15711665761..1666144 [-], 384329309548  [UniProt] Conjugal transfer protein TrbC
15Alide2_15721666141..1667193 [-], 1053329309549  [UniProt] P-type conjugative transfer ATPase TrbB
16Alide2_15731667190..1667654 [-], 465329309550  [UniProt] CopG-like domain-containing protein DNA-binding protein
17Alide2_15741667651..1669651 [-], 2001329309551  [UniProt] TRAG family protein
18Alide2_15751669887..1670165 [-], 279329309552  [UniProt] putative lipoprotein
19Alide2_15761670162..1671106 [-], 945329309553  [UniProt] transcriptional regulator, LysR family
20Alide2_15771671209..1672462 [-], 1254329309554  [UniProt] monooxygenase FAD-binding protein
21Alide2_15781672473..1673990 [-], 1518329309555  [UniProt] RND efflux system, outer membrane lipoprotein, NodT family
22Alide2_15791674003..1675118 [-], 1116329309556  [UniProt] ABC-2 type transporter
23Alide2_15801675124..1676266 [-], 1143329309557  [UniProt] ABC-2 type transporter
24Alide2_15811676263..1678041 [-], 1779329309558  [UniProt] Sulfate-transporting ATPase, Polyamine-transporting ATPase
25Alide2_15821678038..1679036 [-], 999329309559  [UniProt] secretion protein HlyD family protein
26Alide2_15831679163..1679855 [+], 693329309560  [UniProt] Transcriptional regulator TetR
27Alide2_15841679860..1681881 [+], 2022329309561  [UniProt] hypothetical protein
28Alide2_15851681968..1683965 [-], 1998329309562  [UniProt] hypothetical protein
29Alide2_15861683962..1684417 [-], 456329309563  [UniProt] hypothetical protein
30Alide2_15871684414..1685001 [-], 588329309564  [UniProt] Peptidase S26, conserved region
31Alide2_15881684998..1685543 [-], 546329309565  [UniProt] hypothetical protein
32Alide2_15891685540..1685824 [-], 285329309566  [UniProt] hypothetical protein
33Alide2_15901685821..1686459 [-], 639329309567  [UniProt] Cobyrinic acid ac-diamide synthase
34Alide2_15911686713..1687570 [-], 858329309568  [UniProt] Replication initiator protein A
35Alide2_15921687597..1687878 [-], 282329309569  [UniProt] hypothetical protein
36Alide2_15931687963..1688736 [-], 774329309570  [UniProt] Protein of unknown function DUF2285
37Alide2_15941689046..1689549 [-], 504329309571  [UniProt] hypothetical protein
38Alide2_15951689637..1689942 [+], 306329309572  [UniProt] helix-turn-helix domain protein
39Alide2_15961690006..1690359 [-], 354329309573  [UniProt] protein of unknown function DUF736
40Alide2_15971691106..1691435 [+], 330329309574  [UniProt] regulatory protein ArsR
41Alide2_15981691449..1691919 [+], 471329309575  [UniProt] Glyoxalase/bleomycin resistance protein/dioxygenase
42Alide2_15991691932..1692429 [+], 498329309576  [UniProt] protein tyrosine phosphatase
43Alide2_16001692440..1693525 [+], 1086329309577  [UniProt] arsenical-resistance protein
44Alide2_16011693543..1693965 [+], 423329309578  [UniProt] arsenate reductase
45Alide2_16021694064..1694366 [+], 303329309579  [UniProt] transcriptional regulator, PadR-like family
46Alide2_16031694363..1695592 [+], 1230329309580  [UniProt] chromate transporter, chromate ion transporter (CHR) family
47Alide2_16041695598..1696128 [+], 531329309581  [UniProt] GCN5-related N-acetyltransferase
48Alide2_16051696336..1698387 [-], 2052329309582  [UniProt] ParB domain protein nuclease
49Alide2_16061698465..1699289 [-], 825329309583  [UniProt] protein of unknown function DUF932VF
50Alide2_16071699816..1700484 [+], 669329309584  [UniProt] hypothetical protein
51Alide2_16081700515..1700865 [-], 351329309585  [UniProt] hypothetical protein
52Alide2_16091701147..1701653 [-], 507329309586  [UniProt] DNA repair protein RadCVF
53Alide2_16101702066..1703208 [+], 1143329309587  [UniProt] hypothetical protein
54Alide2_16111703212..1703799 [+], 588329309588  [UniProt] hypothetical protein
55Alide2_16121703841..1704326 [+], 486329309589  [UniProt] Domain of unknown function DUF1863
56Alide2_16131704343..1705005 [-], 663329309590  [UniProt] Uracil-DNA glycosylase superfamily
57Alide2_16141705002..1706138 [-], 1137329309591  [UniProt] hypothetical protein
58Alide2_16151706142..1706768 [-], 627329309592  [UniProt] hypothetical protein
59Alide2_16161706768..1707235 [-], 468329309593  [UniProt] Domain of unknown function DUF1863
60Alide2_16171707324..1707626 [-], 303329309594  [UniProt] transcriptional regulator, XRE familyTA
61Alide2_16181707610..1707993 [-], 384329309595  [UniProt] hypothetical proteinTA
62Alide2_16191708133..1709335 [-], 1203329309596  [UniProt] integrase family protein
63Alide2_16201709584..1710213 [+], 630329309597 hypothetical protein
64Alide2_16211710338..1712296 [+], 1959329309598 excinuclease ABC, C subunit
65Alide2_16221712326..1712913 [+], 588329309599 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
66Alide2_16231713258..1713530 [+], 273329309600 histone family protein DNA-binding protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins57Fasta
Identified as part of this study from CP002657