ICEberg
ICEberg
ICEberg ID342
NameICEBglBSR3-1
FamilyTn4371
OrganismBurkholderia gladioli BSR3
Size (bp)~43 K
GC content [Genome] (%)62 [67]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002599 (ICE sequence without defined boundaries in this genome)
Replicon[NC_015381]
Genome coordinates2871875..2914547
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEBglBSR3-1 form CP002599
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1bgla_1g248702866984..2868006 [+], 1023327369755 hypothetical protein
2bgla_1g248802868042..2869874 [+], 1833327369756 hypothetical protein
3bgla_1g248902869878..2871611 [+], 1734327369757 predicted DNA helicase
4bgla_1g249002871651..2871878 [-], 228327369758 hypothetical protein
5bgla_1g249102871875..2873191 [-], 1317327369759  [UniProt] conjugation TrbI family protein
6bgla_1g249202873194..2874192 [-], 999327369760  [UniProt] P-type conjugative transfer protein TrbG
7bgla_1g249302874189..2874896 [-], 708327369761  [UniProt] conjugal transfer protein TrbF
8bgla_1g249402874920..2876296 [-], 1377327369762  [UniProt] TrbL/VirB6 plasmid conjugal transfer protein
9bgla_1g249502876308..2877036 [-], 729327369763  [UniProt] P-type conjugative transfer protein TrbJ
10bgla_1g249602877033..2879483 [-], 2451327369764  [UniProt] ATPase
11bgla_1g249702879498..2879767 [-], 270327369765  [UniProt] conjugal transfer protein trbD
12bgla_1g249802879764..2880147 [-], 384327369766  [UniProt] Conjugal transfer protein TrbC
13bgla_1g249902880144..2881163 [-], 1020327369767  [UniProt] P-type conjugative transfer ATPase TrbB
14bgla_1g250002881160..2881636 [-], 477327369768  [UniProt] CopG domain protein DNA-binding domain protein
15bgla_1g250102881633..2883636 [-], 2004327369769  [UniProt] conjugal transfer protein TraG
16bgla_1g250202883858..2884106 [-], 249327369770  [UniProt] putative lipoprotein
17bgla_1g250302884103..2885047 [-], 945327369771  [UniProt] transcriptional regulator, LysR familyVF
18bgla_1g250402885137..2886336 [-], 1200327369772  [UniProt] hypothetical protein
19bgla_1g250502886556..2887461 [-], 906327369773  [UniProt] Pirin domain protein
20bgla_1g250602887563..2888171 [-], 609327369774  [UniProt] putative acyl carrier protein phosphodiesterase
21bgla_1g250802888692..2889711 [-], 1020327369775  [UniProt] short-chain dehydrogenase/reductase SDR
22bgla_1g250902889789..2890202 [+], 414327369776  [UniProt] transposaseVF
23bgla_1g251002890252..2890692 [+], 441327369777  [UniProt] transcriptional regulator
24bgla_1g251102890870..2892831 [-], 1962327369778  [UniProt] type IV secretory pathway VirD2 component
25bgla_1g251202892828..2893271 [-], 444327369779  [UniProt] hypothetical protein
26bgla_1g251302893268..2893870 [-], 603327369780  [UniProt] hypothetical protein
27bgla_1g251402893867..2894400 [-], 534327369781  [UniProt] hypothetical protein
28bgla_1g251502894397..2894672 [-], 276327369782  [UniProt] hypothetical protein
29bgla_1g251602894669..2895307 [-], 639327369783  [UniProt] cobyrinic Acid a,c-diamide synthase
30bgla_1g251702895549..2896397 [-], 849327369784  [UniProt] replication protein A
31bgla_1g251802896412..2896693 [-], 282327369785  [UniProt] hypothetical protein
32bgla_1g251902896819..2897574 [-], 756327369786  [UniProt] hypothetical protein
33bgla_1g252002897898..2898248 [-], 351327369787  [UniProt] hypothetical protein
34bgla_1g252102898568..2898861 [+], 294327369788  [UniProt] XRE family transcriptional regulator
35bgla_1g252202898931..2899248 [-], 318327369789  [UniProt] hypothetical protein
36bgla_1g252402900012..2902063 [-], 2052327369790  [UniProt] nuclease
37bgla_1g252502902142..2902966 [-], 825327369791  [UniProt] hypothetical proteinVF
38bgla_1g252802903631..2904773 [+], 1143327369792  [UniProt] hypothetical protein
39bgla_1g252902904777..2905394 [+], 618327369793  [UniProt] hypothetical protein
40bgla_1g253002905391..2905876 [+], 486327369794  [UniProt] hypothetical protein
41bgla_1g253102905879..2906460 [+], 582327369795  [UniProt] hypothetical protein
42bgla_1g253202906549..2907997 [+], 1449327369796  [UniProt] hypothetical protein
43bgla_1g253302908026..2908583 [+], 558327369797  [UniProt] hypothetical protein
44bgla_1g253402908725..2909387 [-], 663327369798  [UniProt] hypothetical protein
45bgla_1g253502909384..2910523 [-], 1140327369799  [UniProt] hypothetical protein
46bgla_1g253602910527..2911153 [-], 627327369800  [UniProt] hypothetical protein
47bgla_1g253702911153..2911620 [-], 468327369801  [UniProt] hypothetical protein
48bgla_1g253802911933..2912316 [+], 384327369802  [UniProt] phage transcriptional regulator, AlpA
49bgla_1g253902912481..2912897 [-], 417327369803  [UniProt] HTH domain DNA binding protein
50bgla_1g254002912899..2913210 [-], 312327369804  [UniProt] hypothetical protein
51bgla_1g254102913291..2914547 [-], 1257327369805  [UniProt] phage integrase
52bgla_1g254202914859..2916478 [-], 1620327369806 GMP synthase, large subunit
53bgla_1g254302916615..2917280 [-], 666327369807 hypothetical protein
54bgla_1g254402917287..2918747 [-], 1461327369808 Inosine-5'-monophosphate dehydrogenase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins47Fasta
Identified as part of this study from CP002599