ICEberg
ICEberg ID345
NameICEBxyXB1A-1
FamilyCTnDOT/ERL
OrganismBacteroides xylanisolvens XB1A
Size (bp)52240
GC content [Genome] (%)50.6 [42]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFP929033 (complete ICE sequence in this contig)
Replicon[FP929033]
Coordinates4227232..4279471
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEBxyXB1A-1 form FP929033
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1BXY_335104222703..4223347 [+], 645295086829 Multiple antibiotic transporter
2BXY_335204224906..4225517 [+], 612295086830 Bacterial DNA-binding protein.
3BXY_335304225748..4227277 [+], 1530295086831 hypothetical protein
4BXY_335404227317..4227514 [-], 198295086832  [UniProt] hypothetical protein
5BXY_335504227623..4228075 [+], 453295086833  [UniProt] hypothetical protein
6BXY_335604228087..4228332 [-], 246295086834  [UniProt] hypothetical protein
7BXY_335704228464..4228685 [+], 222295086835  [UniProt] hypothetical protein
8BXY_335804228699..4229121 [+], 423295086836  [UniProt] hypothetical protein
9BXY_336004229562..4230413 [+], 852295086837  [UniProt] hypothetical protein
10BXY_336104230438..4230695 [+], 258295086838  [UniProt] hypothetical protein
11BXY_336204230728..4230949 [+], 222295086839  [UniProt] hypothetical protein
12BXY_336304230946..4231191 [+], 246295086840  [UniProt] hypothetical protein
13BXY_336404231237..4231545 [+], 309295086841  [UniProt] hypothetical protein
14BXY_336504231663..4231884 [+], 222295086842  [UniProt] hypothetical protein
15BXY_336604231948..4232475 [-], 528295086843  [UniProt] Phage-related lysozyme (muraminidase)
16BXY_336704232472..4232975 [-], 504295086844  [UniProt] hypothetical protein
17BXY_336804232972..4233883 [-], 912295086845  [UniProt] DNA primase (bacterial type)
18BXY_336904233883..4234377 [-], 495295086846  [UniProt] Conjugative transposon protein TraO.
19BXY_337004234461..4235447 [-], 987295086847  [UniProt] hypothetical protein
20BXY_337104235492..4236862 [-], 1371295086848  [UniProt] Protein of unknown function (DUF3714).
21BXY_337204236831..4237151 [-], 321295086849  [UniProt] hypothetical protein
22BXY_337304237158..4237781 [-], 624295086850  [UniProt] hypothetical protein
23BXY_337404237813..4238817 [-], 1005295086851  [UniProt] Homologues of TraJ from Bacteroides conjugative transposon.
24BXY_337604239474..4239833 [-], 360295086852  [UniProt] hypothetical protein
25BXY_337704239884..4242376 [-], 2493295086853  [UniProt] Domain of unknown function DUF87.
26BXY_337904242735..4243046 [-], 312295086854  [UniProt] hypothetical protein
27BXY_338004243249..4243977 [-], 729295086855  [UniProt] hypothetical protein
28BXY_338104243999..4244346 [-], 348295086856  [UniProt] Protein of unknown function (DUF3408).
29BXY_338204244349..4244789 [-], 441295086857  [UniProt] Protein of unknown function (DUF3408).
30BXY_338404246264..4246689 [+], 426295086858  [UniProt] hypothetical protein
31BXY_338504246668..4247918 [+], 1251295086859  [UniProt] Relaxase/Mobilisation nuclease domain.
32BXY_338604247951..4249960 [+], 2010295086860  [UniProt] Type IV secretory pathway, VirD4 components
33BXY_338704250335..4251549 [+], 1215295086861  [UniProt] Transposase and inactivated derivatives
34BXY_338804251643..4253283 [-], 1641295086862  [UniProt] Superfamily I DNA and RNA helicases
35BXY_338904253288..4255069 [-], 1782295086863  [UniProt] Predicted ATP-dependent endonuclease of the OLD family
36BXY_339004255089..4256219 [-], 1131295086864  [UniProt] Predicted ATPase (AAA+ superfamily)
37BXY_339104256519..4257136 [-], 618295086865  [UniProt] RteC protein.
38BXY_339204257347..4257760 [-], 414295086866  [UniProt] RibD C-terminal domain.
39BXY_339304258042..4259364 [-], 1323295086867  [UniProt] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
40BXY_339404259357..4261675 [-], 2319295086868  [UniProt] Signal transduction histidine kinase
41BXY_339504261675..4263600 [-], 1926295086869  [UniProt] small GTP-binding protein domainAR
42BXY_339604263857..4264714 [-], 858295086870  [UniProt] Acetyltransferases
43BXY_339704264726..4265103 [-], 378295086871  [UniProt] SnoaL-like polyketide cyclase.
44BXY_339804265688..4271531 [-], 5844295086872  [UniProt] Helicase conserved C-terminal domain./SNF2 family N-terminal domain./N-6 DNA Methylase.
45BXY_339904271521..4271973 [-], 453295086873  [UniProt] Domain of unknown function (DUF1896).
46BXY_340004272137..4274227 [-], 2091295086874  [UniProt] DNA topoisomerase III, bacteria and conjugative plasmid
47BXY_340104274287..4275876 [-], 1590295086875  [UniProt] hypothetical protein
48BXY_340204275896..4276246 [-], 351295086876  [UniProt] hypothetical protein
49BXY_340304276250..4276606 [-], 357295086877  [UniProt] DNA binding domain, excisionase family
50BXY_340404276815..4277108 [+], 294295086878  [UniProt] hypothetical protein
51BXY_340504277140..4277448 [+], 309295086879  [UniProt] DNA binding domain, excisionase family
52BXY_340604277526..4277888 [-], 363295086880  [UniProt] hypothetical protein
53BXY_340704277901..4279136 [-], 1236295086881  [UniProt] Site-specific recombinase XerD
54BXY_340804279563..4280585 [+], 1023295086882 hypothetical protein
55BXY_340904280939..4284067 [+], 3129295086883 Outer membrane receptor proteins, mostly Fe transport
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins50Fasta
Identified as part of this study from FP929033