ICEberg
ICEberg ID346
NameICEHinB
FamilyICEHin1056
OrganismHaemophilus influenzae 10810
Size (bp)55996
GC content [Genome] (%)38.8 [38]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFQ312006 (complete ICE sequence in this genome)
Replicon[FQ312006]
Genome coordinates87548..143543
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICEHinB form FQ312006
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1HIB_0075083095..83883 [+], 789301168675 predicted DNase
2HIB_0076084213..84467 [+], 255301168676 hypothetical protein
3HIB_0077084536..84859 [-], 324301168677 thioredoxin 1
4HIB_0078084979..85974 [-], 996301168678 fermentative D-lactate dehydrogenase, NAD-dependent
5HIB_0079085987..87096 [-], 1110301168679 cystathionine gamma-synthase, PLP-dependent
6HIB_0080087688..88524 [+], 837301168680  [UniProt] predicted atpase involved in chromosome partitioning
7dnaB288526..89881 [+], 1356301168681  [UniProt] replicative dna helicase (ec 3.6.1.-)
8HIB_0082089874..91574 [+], 1701301168682  [UniProt] conserved hypothetical protein
9HIB_0083091574..92125 [+], 552301168683  [UniProt] conserved hypothetical protein
10HIB_0084092275..93498 [+], 1224301168684  [UniProt] putative uncharacterized protein
11HIB_0085093795..94550 [+], 756301168685  [UniProt] putative uncharacterized protein
12HIB_0086094565..95038 [+], 474301168686  [UniProt] conserved hypothetical protein
13HIB_0087095284..95706 [+], 423301168687  [UniProt] Single-strand binding proteinVF
14HIB_0088095733..96251 [+], 519301168688  [UniProt] conserved putative lipoprotein
15HIB_0089096467..97024 [-], 558301168689  [UniProt] putative uncharacterized protein
16topB2; OrderedLocusNames=NTHI011297115..99160 [+], 2046301168690  [UniProt] dna topoisomerase iii (ec 5.99.1.2). dna topoisomerase iii (ec 5.99.1.2)
17HIB_00910100045..100473 [+], 429301168691  [UniProt] conserved hypothetical protein
18HIB_00920100588..101229 [+], 642301168692  [UniProt] conserved hypothetical protein
19HIB_00930101369..101839 [+], 471301168693  [UniProt] putative DNA repair radC-like proteinVF
20HIB_00940101932..102528 [+], 597301168694  [UniProt] conserved hypothetical protein
21HIB_00950102586..103350 [+], 765301168695  [UniProt] conserved hypothetical protein
22HIB_00960103449..104078 [+], 630301168696  [UniProt] conserved putative lipoprotein
23HIB_00970104082..104822 [+], 741301168697  [UniProt] conserved putative exported protein
24HIB_00980104801..105559 [+], 759301168698  [UniProt] conserved putative exported protein
25HIB_00990105575..106081 [+], 507301168699  [UniProt] conserved putative exported protein
26HIB_01000106078..108327 [+], 2250301168700  [UniProt] conserved hypothetical protein
27HIB_01010108311..108646 [+], 336301168701  [UniProt] putative uncharacterized protein
28HIB_01020108646..109332 [+], 687301168702  [UniProt] conserved putative membrane protein
29HIB_01030109463..109813 [+], 351301168703  [UniProt] conserved putative exported protein
30HIB_01040109817..110062 [+], 246301168704  [UniProt] putative uncharacterized protein
31HIB_01050110082..110483 [+], 402301168705  [UniProt] conserved putative membrane protein
32HIB_01060110503..110874 [+], 372301168706  [UniProt] conserved putative membrane protein
33HIB_01070110886..111530 [+], 645301168707  [UniProt] conserved putative exported protein
34HIB_01080111530..112399 [+], 870301168708  [UniProt] conserved hypothetical protein
35HIB_01090112410..113810 [+], 1401301168709  [UniProt] conserved putative exported protein
36HIB_01100113820..114227 [+], 408301168710  [UniProt] conserved putative lipoprotein
37HIB_01110114243..117113 [+], 2871301168711  [UniProt] conserved hypothetical protein
38HIB_01120117085..117528 [+], 444301168712  [UniProt] conserved hypothetical protein
39HIB_01130117538..117861 [+], 324301168713  [UniProt] conserved hypothetical membrane protein
40HIB_01140117870..119363 [+], 1494301168714  [UniProt] conserved putative membrane protein
41HIB_01150119419..119748 [-], 330301168715  [UniProt] conserved hypothetical membrane protein
42tnpA119906..123040 [-], 3135301168716  [UniProt] transposase
43HIB_01170123075..123632 [+], 558301168717  [UniProt] resolvase
44bla123680..124540 [+], 861301168718  [UniProt] beta-lactamase tem precursor (ec 3.5.2.6) (penicillinase)AR
45HIB_01190124764..124943 [+], 180301168719  [UniProt] hypothetical protein
46HIB_01200124988..125395 [-], 408301168720  [UniProt] hypothetical exported protein
47HIB_01210125411..127411 [-], 2001301168721  [UniProt] conserved putative exported protein
48HIB_01220127426..128367 [-], 942301168722  [UniProt] conserved putative exported protein
49HIB_01230128364..128807 [-], 444301168723  [UniProt] conserved hypothetical protein
50HIB_01240129182..129538 [+], 357301168724  [UniProt] conserved hypothetical membrane protein
51HIB_01250129623..129856 [+], 234301168725  [UniProt] conserved hypothetical protein
52HIB_01260129910..130107 [+], 198301168726  [UniProt] putative uncharacterized protein
53HIB_01270130111..130269 [+], 159301168727  [UniProt] hypothetical protein
54HIB_01280130400..131353 [+], 954301168728  [UniProt] conserved putative antirestriction protein
55HIB_01290131457..132218 [+], 762301168729  [UniProt] possible type I restriction enzyme M subunit
56HIB_01300132444..133010 [+], 567301168730  [UniProt] hypothetical protein
57HIB_01310133050..133424 [+], 375301168731  [UniProt] conserved hypothetical protein
58HIB_01320133414..134091 [+], 678301168732  [UniProt] conserved hypothetical protein
59HIB_01330134069..134686 [+], 618301168733  [UniProt] conserved hypothetical protein
60HIB_01340134950..135549 [-], 600301168734  [UniProt] e14 prophage; site-specific DNA recombinase
61HIB_01350135564..135755 [-], 192301168735  [UniProt] hypothetical protein
62HIB_01360135770..136057 [-], 288301168736  [UniProt] putative uncharacterized protein
63HIB_01370136224..136460 [-], 237301168737  [UniProt] hypothetical protein
64HIB_01380136482..136769 [-], 288301168738  [UniProt] putative uncharacterized protein
65HIB_01390136795..136911 [-], 117301168739  [UniProt] putative uncharacterized protein
66HIB_01400137195..137425 [+], 231301168740  [UniProt] putative uncharacterized protein
67HIB_01410137661..138374 [+], 714301168741  [UniProt] conserved hypothetical protein
68HIB_01420139094..140347 [+], 1254301168742  [UniProt] hypothetical protein
69HIB_01430140490..142406 [+], 1917301168743  [UniProt] conserved hypothetical protein
70HIB_01440142593..143309 [+], 717301168744  [UniProt] putative site-specific recombinase
71HIB_01450143943..145220 [-], 1278301168745 threonine synthase
72HIB_01460145263..146207 [-], 945301168746 homoserine kinase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins65Fasta
(1) Juhas M; Power PM; Harding RM; Ferguson DJ; Dimopoulou ID; Elamin AR; Mohd-Zain Z; Hood DW; Adegbola R; Erwin A; Smith A; Munson RS; Harrison A; Mansfield L; Bentley S; Crook DW (2007). Sequence and functional analyses of Haemophilus spp. genomic islands. Genome Biol. 8(11):R237. [PudMed:17996041] in_silico
 
in_silico in silico analysis literature