ICEberg
ICEberg ID356
NameICESauST398-4
FamilyICE6013
OrganismStaphylococcus aureus subsp. aureus ST398
Size (bp)13361
GC content [Genome] (%)30 [33]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAM990992 (complete ICE sequence in this genome)
Replicon chromosome (2872582 bp, Project:29427) [AM990992]
Genome coordinates2108600..2121960
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESauST398-4 form AM990992
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SAPIG20252104605..2105717 [-], 1113283471202 transposition regulatory protein TnpA
2SAPIG20262105995..2106207 [+], 213283471203 conserved hypothetical protein
3SAPIG20272106264..2106437 [-], 174283471204 conserved hypothetical protein
4SAPIG20282106888..2107928 [+], 1041283471205 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
5SAPIG20292107985..2108578 [-], 594283471206 conserved hypothetical protein
6SAPIG20302108820..2109173 [-], 354283471207  [UniProt] transposase InsI for insertion sequence element IS30B/C/D
7SAPIG20312109337..2109840 [-], 504283471208  [UniProt] N-region of transposase of
8SAPIG20322109949..2110302 [-], 354283471209  [UniProt] lipoprotein, putative
9SAPIG20332110358..2110948 [-], 591283471210  [UniProt] conserved hypothetical protein
10SAPIG20342110955..2112001 [-], 1047283471211  [UniProt] transfer complex protein TraG
11SAPIG20352111991..2113850 [-], 1860283471212  [UniProt] membrane protein, putative
12SAPIG20362113855..2115093 [-], 1239283471213  [UniProt] ftsk/spoiiie family protein
13SAPIG20372115096..2115212 [-], 117283471214  [UniProt] ftsk/spoiiie family protein
14SAPIG20382115266..2117761 [-], 2496283471215  [UniProt] conserved hypothetical protein
15SAPIG20392117796..2118179 [-], 384283471216  [UniProt] conserved hypothetical protein
16SAPIG20402118191..2118451 [-], 261283471217  [UniProt] conserved hypothetical protein
17SAPIG20412118456..2119511 [-], 1056283471218  [UniProt] conserved hypothetical protein
18SAPIG20422119572..2120351 [-], 780283471219  [UniProt] replication initiation factor family protein
19SAPIG20432120348..2120518 [-], 171283471220  [UniProt] replication initiation factor family protein
20SAPIG20442120837..2121139 [-], 303283471221  [UniProt] conserved hypothetical protein
21SAPIG20452121153..2121473 [-], 321283471222  [UniProt] conserved hypothetical protein
22SAPIG20462121624..2121908 [-], 285283471223  [UniProt] conserved hypothetical protein
23SAPIG20472121940..2122191 [-], 252283471224 conserved hypothetical protein
24SAPIG20482122188..2122745 [-], 558283471225 conserved hypothetical protein
25SAPIG20492122805..2123329 [-], 525283471226 conserved hypothetical protein
26SAPIG20502123450..2124013 [+], 564283471227 thioredoxin
27SAPIG20512124077..2124817 [-], 741283471228 membrane protein, putative
28SAPIG20522124817..2125689 [-], 873283471229 ABC transporter
29SAPIG20532125686..2126366 [-], 681283471230 membrane protein, putative
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins17Fasta
Identified as part of this study from AM990992