ICEberg
ICEberg
ICEberg ID363
NameICESpnA213
FamilyTn5253
OrganismStreptococcus pneumoniae SpnA213
Size (bp)> 67 K
GC content [Genome] (%)-
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFM201786 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of ICESpnA213 from FM201786
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-131..1312 [-], 1182218473417  [UniProt] hypothetical protein
2-1257..1640 [-], 384218473418  [UniProt] hypothetical protein
3-1725..1994 [-], 270218473419  [UniProt] hypothetical protein
4-2073..2222 [+], 150218473420  [UniProt] hypothetical protein
5-2224..2451 [-], 228218473421  [UniProt] hypothetical protein
6-2554..3120 [-], 567218473422  [UniProt] hypothetical protein
7-3256..4383 [-], 1128218473423  [UniProt] hypothetical protein
8-4370..4735 [-], 366218473424  [UniProt] hypothetical protein
9-4740..5096 [-], 357218473425  [UniProt] hypothetical protein
10-5391..5681 [-], 291218473426  [UniProt] hypothetical protein
11-5671..6033 [-], 363218473427  [UniProt] hypothetical protein
12-6033..7322 [-], 1290213031119  [UniProt] hypothetical protein
13-7453..8136 [-], 684213031120  [UniProt] hypothetical protein
14-8400..9158 [-], 759213031121  [UniProt] hypothetical proteinTA
15-9158..9634 [-], 477213031122  [UniProt] hypothetical proteinTA
16-9910..10554 [-], 645213031123  [UniProt] hypothetical protein
17-10640..11233 [-], 594213031124  [UniProt] hypothetical protein
18rep11656..12591 [+], 936213031125  [UniProt] replication protein
19cat13456..14106 [-], 651213031126  [UniProt] chloramphenicol acetyltransferaseAR
20-14278..14526 [-], 249213031127  [UniProt] hypothetical protein
21-14766..15554 [-], 789213031128  [UniProt] hypothetical protein
22-16030..16788 [-], 759213031129  [UniProt] hypothetical proteinTA
23-16788..17264 [-], 477213031130  [UniProt] hypothetical proteinTA
24-17332..17604 [-], 273213031131  [UniProt] hypothetical protein
25-17642..18025 [-], 384213031132  [UniProt] hypothetical protein
26-18022..18255 [-], 234213031133  [UniProt] hypothetical protein
27-18306..19391 [-], 1086213031134  [UniProt] hypothetical protein
28-19401..20042 [-], 642213031135  [UniProt] hypothetical protein
29-20202..20399 [+], 198218473428  [UniProt] hypothetical protein
30-20413..20709 [-], 297218473429  [UniProt] hypothetical protein
31-20723..21007 [-], 285218473430  [UniProt] hypothetical protein
32-21082..21891 [-], 810218473431  [UniProt] hypothetical protein
33-21931..25878 [-], 3948218473432  [UniProt] hypothetical protein
34-25895..27313 [-], 1419218473433  [UniProt] hypothetical protein
35-27346..27756 [-], 411218473434  [UniProt] hypothetical protein
36-28187..28594 [-], 408218473435  [UniProt] hypothetical protein
37-28579..29502 [-], 924218473436  [UniProt] hypothetical protein
38-29520..30278 [-], 759218473437  [UniProt] hypothetical protein
39-30816..31010 [+], 195218473438  [UniProt] hypothetical protein
40int-Tn31261..32478 [-], 1218218473439  [UniProt] integrase
41xis-Tn32560..32763 [-], 204218473440  [UniProt] excisionase
42-32747..32998 [+], 252218473441  [UniProt] hypothetical protein
43-33224..33454 [-], 231218473442  [UniProt] hypothetical protein
44-33451..33873 [-], 423218473443  [UniProt] hypothetical protein
45-34102..34173 [-], 72218473444  [UniProt] hypothetical protein
46-34378..34731 [+], 354218473445  [UniProt] hypothetical protein
47-34791..34979 [-], 189218473446  [UniProt] hypothetical protein
48tetM35076..36995 [-], 1920218473447  [UniProt] tetracycline resistance protein TetMAR
49-37011..37097 [-], 87218473448  [UniProt] hypothetical protein
50-37372..38034 [-], 663218473449  [UniProt] hypothetical protein
51-38517..39032 [-], 516218473450  [UniProt] hypothetical proteinVF
52-39299..41410 [-], 2112218473451  [UniProt] hypothetical protein
53-41479..43926 [-], 2448218473452  [UniProt] hypothetical protein
54-43910..44416 [-], 507218473453  [UniProt] hypothetical protein
55-44391..44888 [-], 498218473454  [UniProt] hypothetical protein
56-45005..45226 [-], 222218473455  [UniProt] hypothetical protein
57-45406..46653 [+], 1248218473456  [UniProt] hypothetical protein
58-46774..46965 [-], 192218473457  [UniProt] hypothetical protein
59-46910..47547 [-], 638218473458  [UniProt] hypothetical proteinAR
60-47904..49322 [-], 1419218473459  [UniProt] hypothetical protein
61-49500..50885 [-], 1386218473460  [UniProt] hypothetical protein
62-50914..51300 [-], 387218473461  [UniProt] hypothetical protein
63-51316..51630 [-], 315218571960  [UniProt] hypothetical protein
64-51653..51772 [-], 120218473462  [UniProt] hypothetical protein
65-51946..52155 [-], 210284803505  [UniProt] hypothetical protein
66-52197..53435 [-], 1239284803506  [UniProt] hypothetical protein
67-53443..54369 [-], 927284803507  [UniProt] hypothetical protein
68-54417..55010 [-], 594284803508  [UniProt] hypothetical protein
69-55022..56380 [-], 1359284803509  [UniProt] putative conjugal transfer protein
70-56412..57380 [-], 969284803510  [UniProt] hypothetical protein
71-57331..57690 [-], 360284803511  [UniProt] hypothetical protein
72-57744..58445 [-], 702284803512  [UniProt] hypothetical protein
73-58612..58854 [-], 243284803513  [UniProt] hypothetical protein
74-58875..60755 [-], 1881284803514  [UniProt] putative conjugal transfer protein TraG
75-60752..61240 [-], 489284803515  [UniProt] hypothetical protein
76-61230..61529 [-], 300284803516  [UniProt] hypothetical protein
77-61812..62648 [-], 837284803517  [UniProt] hypothetical protein
78-62648..63292 [-], 645284803518  [UniProt] hypothetical protein
79-63366..63953 [-], 588284803519  [UniProt] hypothetical protein
80-63956..64111 [-], 156284803520  [UniProt] hypothetical protein
81-64201..64581 [-], 381284803521  [UniProt] hypothetical protein
82-64574..65692 [-], 1119284803522  [UniProt] putative methyltransferase
83-66228..66512 [-], 285284803523  [UniProt] hypothetical protein
84-66624..67007 [-], 384284803524  [UniProt] putative replication initiator protein A
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins84Fasta
(1) Mingoia M; Tili E; Manso E; Varaldo PE; Montanari MP (2011). Heterogeneity of Tn5253-like composite elements in clinical Streptococcus pneumoniae isolates. Antimicrob Agents Chemother. 55(4):1453-9. [PudMed:21263055] experimental
 
experimental experimental literature