ICEberg
ICEberg ID364
NameTn5253
FamilyTn5253
OrganismStreptococcus pneumoniae DP1322
Size (bp)64528
GC content [Genome] (%)35.5
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceEU351020 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates833..65360
Link to view genome context of this ICE in the genome browser
search genbank This ICE is derived from GenBank without published report.
Complete gene list of Tn5253 form EU351020
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1spr10421..353 [+], 353183217286 IgA-specific zinc metalloproteinase
2-1070..1243 [+], 174183217287  [UniProt] unknown
3repA1240..2019 [+], 780183217288  [UniProt] RepA
4-2020..2121 [+], 102183217289  [UniProt] unknown
5-2118..3476 [+], 1359183217290  [UniProt] methyltransferase
6-3460..3909 [+], 450183217291  [UniProt] unknown
7-3902..4282 [+], 381183217292  [UniProt] unknown
8-4295..4528 [+], 234183217293  [UniProt] unknown
9-4531..5118 [+], 588183217294  [UniProt] putative protease
10-5246..5836 [+], 591183217295  [UniProt] abortive infection protein AbiEi
11-5836..6672 [+], 837183217296  [UniProt] abortive infection protein AbiEii
12-6955..7254 [+], 300183217297  [UniProt] unknown
13-7244..7732 [+], 489183217298  [UniProt] unknown
14traG7732..9609 [+], 1878183217299  [UniProt] TraG protein
15-9630..9872 [+], 243183217300  [UniProt] unknown
16-9889..10743 [+], 855183217301  [UniProt] unknown
17-10797..11156 [+], 360183217302  [UniProt] unknown
18virB411107..13464 [+], 2358183217303  [UniProt] type IV secretion protein VirB4
19-13476..16289 [+], 2814183217304  [UniProt] putative peptidoglycan hydrolase
20-16341..16469 [+], 129183217305  [UniProt] unknown
21-16591..16785 [-], 195183217306  [UniProt] truncated ISSth5 transposase
22int17306..18523 [-], 1218183217307  [UniProt] integrase
23xis18605..18808 [-], 204183217308  [UniProt] excisionase
24-18792..19043 [+], 252183217309  [UniProt] unknown
25-19269..19499 [-], 231183217310  [UniProt] unknown
26-19496..19918 [-], 423183217311  [UniProt] putative sigma factor
27-20147..20293 [-], 147183217312  [UniProt] unknown
28-20423..20776 [+], 354183217313  [UniProt] putative transcriptional regulator
29-20836..21024 [-], 189183217314  [UniProt] unknown
30tet(M)21122..23041 [-], 1920183217315  [UniProt] tetracycline resistance protein Tet(M)AR
31-23057..23143 [-], 87283558392  [UniProt] tet(M) leader peptide
32-23418..24350 [-], 933183217316  [UniProt] unknown
33-24347..25348 [-], 1002183217317  [UniProt] putative cell wall hydrolaseVF
34-25345..27522 [-], 2178183217318  [UniProt] unknown
35virB427525..29972 [-], 2448183217319  [UniProt] type IV secretion protein VirB4
36-29956..30462 [-], 507183217320  [UniProt] unknown
37ardA30437..30934 [-], 498183217321  [UniProt] antirestriction protein ArdA
38-31051..31272 [-], 222183217322  [UniProt] unknown
39-31315..32520 [-], 1206183217323  [UniProt] relaxase
40-32698..34083 [-], 1386183217324  [UniProt] putative FtsK-SpoIIIE family protein
41-34112..34495 [-], 384183217325  [UniProt] unknown
42-34514..34828 [-], 315183217326  [UniProt] unknown
43-34851..34970 [-], 120283558391  [UniProt] unknown
44-35267..35998 [+], 732183217328  [UniProt] putative ATP-binding protein
45-36016..37332 [+], 1317183217329  [UniProt] putative permease protein
46-37388..37492 [-], 105183217330  [UniProt] unknown
47-37763..38173 [+], 411183217331  [UniProt] unknown
48-38221..44307 [+], 6087183217332  [UniProt] putative restriction-modification protein
49-44382..44666 [+], 285183217333  [UniProt] unknown
50-44680..44976 [+], 297183217334  [UniProt] unknown
51-44990..45187 [-], 198183217335  [UniProt] unknown
52-45347..45988 [+], 642183217336  [UniProt] unknown
53-45998..47083 [+], 1086183217337  [UniProt] unknown
54-47134..47367 [+], 234183217338  [UniProt] unknown
55-47364..47747 [+], 384183217339  [UniProt] unknown
56-47785..48057 [+], 273183217340  [UniProt] unknown
57pezA48125..48601 [+], 477183217341  [UniProt] antitoxin PezATA
58pezT48601..49359 [+], 759183217342  [UniProt] toxin PezTTA
59-49835..50623 [+], 789183217343  [UniProt] unknown
60-50862..51110 [+], 249183217344  [UniProt] unknown
61-51281..51931 [+], 651183217345  [UniProt] chloramphenicol acetyl transferase CATAR
62-52236..52325 [-], 90183217346  [UniProt] unknown
63-52442..52666 [-], 225183217347  [UniProt] unknown
64-52796..53641 [-], 846183217348  [UniProt] replication protein
65-53657..53926 [+], 270183217349  [UniProt] unknown
66-54016..54753 [+], 738183217350  [UniProt] truncated neopullulanase
67-54832..55476 [+], 645183217351  [UniProt] unknown
68pezA55752..56228 [+], 477183217352  [UniProt] antitoxin PezATA
69pezT56228..56998 [+], 771183217353  [UniProt] toxin PezTTA
70umuD57255..57938 [+], 684183217354  [UniProt] UV resistance protein UmuD
71umuC57941..59356 [+], 1416183217355  [UniProt] UV resistance protein UmuC
72-59410..59718 [+], 309183217356  [UniProt] unknown
73-59708..59998 [+], 291183217357  [UniProt] unknown
74-60293..60649 [+], 357183217358  [UniProt] unknown
75-60654..61019 [+], 366183217359  [UniProt] mobilization protein MobC
76-61006..62835 [+], 1830183217360  [UniProt] relaxase
77-62939..63166 [+], 228183217361  [UniProt] putative transcriptional regulator
78-63214..63393 [-], 180183217362  [UniProt] unknown
79xis63433..63666 [+], 234183217363  [UniProt] excisionase
80int63751..65259 [+], 1509183217364  [UniProt] integrase
81spr104365341..66192 [+], 852183217365 ribosomal biogenesis GTPase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins79Fasta
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