ICEberg
ICEberg ID376
NameICEEfaV583-1
FamilyUnclassified
OrganismEnterococcus faecalis V583
Size (bp)54255
GC content [Genome] (%)53 [37]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAE016830 (complete ICE sequence in this genome)
Replicon chromosome (3218031 bp, Project:70) [NC_004668]
Genome coordinates2204066..2258320
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICEEfaV583-1 form AE016830
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1EF_22802201166..2203613 [-], 244829344248 conserved hypothetical protein
2EF_22812203600..2203989 [-], 39029344249 conserved hypothetical protein
3EF_22822204066..2204680 [+], 61529344250  [UniProt]  [KEGG]conserved domain protein
4EF_22832204960..2206573 [-], 161429344251  [UniProt]  [KEGG]site-specific recombinase, resolvase family, putative
5EF_22842206701..2206877 [-], 17729344252  [UniProt]  [KEGG]hypothetical protein
6EF_22852206945..2207805 [-], 86129344253  [UniProt]  [KEGG]hypothetical protein
7EF_22862207802..2209013 [-], 121229344254  [UniProt]  [KEGG]ParB-like nuclease domain protein
8EF_22872209172..2209732 [+], 56129344255  [UniProt]  [KEGG]hypothetical protein
9EF_22882209998..2210117 [+], 12029344256  [UniProt]  [KEGG]hypothetical protein
10EF_22892210145..2210591 [-], 44729344257  [UniProt]  [KEGG]hypothetical protein
11EF_22902210747..2211127 [-], 38129344258  [UniProt]  [KEGG]RNA polymerase sigma-70 factor, ECF subfamily
12EF_22912211601..2211966 [+], 36629344259  [UniProt]  [KEGG]transcriptional regulator, Cro/CI family
13EF_22922211933..2212277 [-], 34529344260  [UniProt]  [KEGG]hypothetical protein
14vanX2212353..2212961 [-], 60929344261  [UniProt]  [KEGG]D-alanyl-D-alanine dipeptidaseAR
15vanB2212967..2213995 [-], 102929344262  [UniProt]  [KEGG]D-alanine--D-lactate ligaseAR
16EF_22952213988..2214959 [-], 97229344263  [UniProt]  [KEGG]D-specific alpha-keto acid dehydrogenaseAR
17vanW2214956..2215783 [-], 82829344264  [UniProt]  [KEGG]vancomycin B-type resistance protein VanWAR
18vanYB2215801..2216607 [-], 80729344265  [UniProt]  [KEGG]D-alanyl-D-alanine carboxypeptidaseAR
19vanSB2216783..2218126 [-], 134429344266  [UniProt]  [KEGG]sensor histidine kinase VanSBAR
20vanRB2218126..2218788 [-], 66329344267  [UniProt]  [KEGG]DNA-binding response regulator VanRBAR
21EF_23002218843..2219031 [-], 18929344268  [UniProt]  [KEGG]streptomycin resistance protein, putative
22EF_23022219565..2219783 [-], 21929344269  [UniProt]  [KEGG]conserved hypothetical protein
23EF_23032220066..2221478 [-], 141329344270  [UniProt]  [KEGG]conserved hypothetical protein
24EF_23042221559..2221834 [+], 27629344271  [UniProt]  [KEGG]transcriptional regulator, Cro/CI family
25EF_23052221837..2222787 [-], 95129344272  [UniProt]  [KEGG]toprim domain protein
26EF_23062222854..2223192 [-], 33929344273  [UniProt]  [KEGG]conserved hypothetical protein
27EF_23072223189..2232710 [-], 952229344274  [UniProt]  [KEGG]conserved hypothetical protein
28EF_23082232905..2233006 [-], 10229344275  [UniProt]  [KEGG]hypothetical protein
29EF_23092233047..2233265 [-], 21929344276  [UniProt]  [KEGG]hypothetical protein
30EF_23102233538..2233987 [-], 45029344277  [UniProt]  [KEGG]hypothetical protein
31EF_23112233984..2234145 [-], 16229344278  [UniProt]  [KEGG]hypothetical protein
32topB-22234375..2236492 [-], 211829344279  [UniProt]  [KEGG]DNA topoisomerase III
33EF_23132236443..2236670 [-], 22829344280  [UniProt]  [KEGG]hypothetical protein
34EF_23142236670..2237956 [-], 128729344281  [UniProt]  [KEGG]bacteriocin, putative
35EF_23152238911..2239159 [-], 24929344282  [UniProt]  [KEGG]hypothetical protein
36EF_23162239156..2240004 [-], 84929344283  [UniProt]  [KEGG]conserved domain protein
37EF_23172239989..2240090 [+], 10229344284  [UniProt]  [KEGG]hypothetical protein
38EF_23182240101..2242878 [-], 277829344285  [UniProt]  [KEGG]peptidase, M23/M37 familyVF
39EF_23192242875..2243990 [-], 111629344286  [UniProt]  [KEGG]hypothetical protein
40EF_23202244004..2246481 [-], 247829344287  [UniProt]  [KEGG]traE protein, putative
41EF_23212246405..2246824 [-], 42029344288  [UniProt]  [KEGG]hypothetical protein
42EF_23222246825..2248129 [-], 130529344289  [UniProt]  [KEGG]conserved domain protein
43EF_23242248728..2249597 [-], 87029344290  [UniProt]  [KEGG]conserved hypothetical protein
44EF_23252249591..2249782 [-], 19229344291  [UniProt]  [KEGG]hypothetical protein
45EF_23262249859..2251745 [-], 188729344292  [UniProt]  [KEGG]group II intron reverse transcriptase maturase
46EF_23272252465..2252596 [-], 13229344293  [UniProt]  [KEGG]hypothetical protein
47EF_23282252661..2254436 [-], 177629344294  [UniProt]  [KEGG]TraG family protein
48EF_23292254433..2254912 [-], 48029344295  [UniProt]  [KEGG]hypothetical protein
49EF_23302254941..2255447 [-], 50729344296  [UniProt]  [KEGG]hypothetical protein
50EF_23312255485..2255916 [-], 43229344297  [UniProt]  [KEGG]hypothetical protein
51EF_23322255995..2256852 [-], 85829344298  [UniProt]  [KEGG]conserved domain protein
52EF_23332256825..2257283 [-], 45929344299  [UniProt]  [KEGG]hypothetical protein
53EF_23342257334..2258320 [-], 98729344300  [UniProt]  [KEGG]conserved domain protein
54EF_23352258996..2259496 [-], 50129344301 conserved hypothetical protein
55EF_23362259509..2259730 [-], 22229344302 conserved hypothetical protein
56EF_23372259735..2259872 [-], 13829344303 hypothetical protein
57EF_23382259869..2261053 [-], 118529344304 transcriptional regulator, Cro/CI family
58EF_23392261311..2261565 [-], 25529344305 hypothetical protein
59EF_23402261591..2262586 [-], 99629344306 C-5 cytosine-specific DNA methylase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins51Fasta
(1) Paulsen IT; Banerjei L; Myers GS; Nelson KE; Seshadri R; Read TD; Fouts DE; Eisen JA; Gill SR; Heidelberg JF; Tettelin H; Dodson RJ; Umayam L; Brinkac L; Beanan M; Daugherty S; DeBoy RT; Durkin S; Kolonay J; Madupu R; Nelson W; Vamathevan J; Tran B; Upton J; Hansen T; Shetty J; Khouri H; Utterback T; Radune D; Ketchum KA; Dougherty BA; Fraser CM (2003). Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis. Science. 299(5615):2071-4. [PudMed:12663927]